G610563 (LOC106582806)


Basic Information

Item Value
gene id G610563
gene name LOC106582806
gene type unknown
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048571.1
NCBI id CM023225.2
chromosome length 90918291
location 43584020 ~ 43584896 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU695128
GAATTGACTCGCTGTTAAGAAAATCCCAGCAATGCAGGTAAAGCAAAAACTCAACCCAGTGCTTAGGCCTACCTTTCCTGTGATGTCATTTACAGCAACATGAACAAAGATGGAGGCCTCCTCCATGCCCTCAAGATAGACATGGCGATAACCTGGCATCATGCTGACGAATGCTATGGTCCTCTGTCCAATGAAGTTTTGTCCTATCGGATCATGGTCCCACACCTGGAAACGCACCAGTGCAATCTGGGTCATGTGGAGGGTGAAGACCAAGCTCTCCTCCCACATGGGATTGAAGCCATTGTCATCCACCACCCTTGTCTGCTGCTTACAGCAATCAATAGGCAGACCGATGATCTCCACCTCTACAAAAGGATCAATaatCTCCCCTCTATCCCCCAG

Function

NR:

description
1-phosphatidylinositol 4,5-bisphosphate phosphodiesterase eta-2-like

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU695128 True 402 TUCP 0.49 4 43584020 43584896

Neighbor

gene id symbol gene type direction distance location
si:dkey-183j2.10 LOC106582807 coding upstream 1709 43567660 ~ 43582311 (+)
mon1bb LOC106582805 coding upstream 38203 43536997 ~ 43545817 (+)
LOC110528952 NA coding upstream 54973 43526931 ~ 43529047 (+)
LOC110527818 NA coding upstream 57352 43524687 ~ 43526668 (+)
LOC110527808 ab14b coding upstream 548809 43027924 ~ 43035211 (+)
ppcs ppcs coding downstream 379581 43964477 ~ 43966869 (+)
si:dkey-264d12.5 LOC106582817 coding downstream 417660 44002556 ~ 44035143 (+)
LOC110527834 LOC106582821 coding downstream 500969 44085865 ~ 44092535 (+)
LOC110527839 NA coding downstream 579360 44164248 ~ 44178065 (+)
mmel1 LOC106582826 coding downstream 630638 44215534 ~ 44261277 (+)
G610545 NA non-coding upstream 23351 43552330 ~ 43560669 (+)
G610528 LOC106582801 non-coding upstream 69277 43513765 ~ 43514743 (+)
G610517 LOC106582800 non-coding upstream 86295 43495012 ~ 43497725 (+)
G610512 cish non-coding upstream 95036 43486861 ~ 43488984 (+)
G610477 NA non-coding upstream 128417 43455337 ~ 43455603 (+)
G610564 LOC106582806 non-coding downstream 352 43585248 ~ 43586231 (+)
G610627 NA non-coding downstream 38700 43623596 ~ 43673775 (+)
G610622 NA non-coding downstream 244942 43829004 ~ 43831880 (+)
G610764 NA non-coding downstream 282306 43867202 ~ 43872623 (+)
G610879 NA non-coding downstream 474211 44059107 ~ 44064534 (+)
G610436 NA other upstream 173214 43410391 ~ 43410806 (+)
G609436 NA other upstream 762775 42820956 ~ 42821245 (+)
G608390 LOC106582745 other upstream 1753212 41827211 ~ 41830808 (+)
G607904 NA other upstream 2120851 41462824 ~ 41463169 (+)
G606977 NA other upstream 2949581 40634181 ~ 40634439 (+)
G613664 NA other downstream 2693838 46278734 ~ 46279333 (+)
LOC110528958 NA other downstream 3047226 46629591 ~ 46638492 (+)
G615624 NA other downstream 4254492 47839388 ~ 47839722 (+)

Expression


Co-expression Network