G610627


Basic Information

Item Value
gene id G610627
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048571.1
NCBI id CM023225.2
chromosome length 90918291
location 43623596 ~ 43673775 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU695217
acacacacacacacacacacacacacacgcacgcacgcacacacacacacacacacacacacttgcaTGCACACAACCAGACCCACACAGAAATCCACATACACCATCACCAGTCGGCATCCTCCTCTATGTAATAATCAGGGGTGGATGTACCATCAAACAGGCCCGGGTCCATTGACTTGCGCTGCTTTCCCCGAGCAAACACCCGGGACAGGGAGCCCAGACtcatcttctccttcttctttgtCTTACGCTT
>TU695216
TACTTCCTGTTCTTTAAATAAAATACTTAATAGATTTACTCTTTTATGCAACATCTCCTGAATGACAAAACATTAAACAGATTATTATCGTAATCACAAATGTAAGAAATGAGGAGGGGTTGTATGCTAAAtagcaaaacaaacagaaaaaaaaGATTCATTGCATCCAGAATGATGCAAGAGAATGAAAAATGGGAATGGGTTTTGTTCCGGCGGGTTAGCGAACACGAACAACAGAGAACGCTTGAGGTTGTTATTTTCACTGCTAACTAATAGATTCCTAACCAAAGCAGCACAGATAATCATGCAGGGGTTTTAGTGCACAGTCCTATGCTTCCCGCTGGCACATGTTAGATAGTTGTCAACTCAATAAGGACAAAAGCGATCTTACAAGGCATTGCTAACAGTGACCCACATctactctgtctctgttctgtttgATCAAAGACCAAACGTGAACCTTTGGCAATTTAAAATGCatttaaacagtgtgtgtgtgtgtgtgtgtgtgtgtgtgttcatacgaGTCACAAACATTTAattattttgtgtgttcaattttttttttgcttCCTGTTGTAAAACCATTGTTTTGGAACCTTATTTTGGTTTTCAGCATTCAGTCTAAGAAACGTATATGGATCGATCAAACACATCTACAGGCTGGGCAGGGTACTGTAAGTCTTTAACGATTGATGTCTGAAACATTCAGCATGGGTAGAACAGAGCAGGAGGCCTACACAAACAAGCACATATtaataatctagctagctagcattcccATACTCCTAAACCTATCTCTATACAAACACACTATTCAGATCACACACTGGCACTCACAGCATCATCCTATTTAATGCTATCCTATTTGTCAATGCTGCCCAGTGGGCTATTTAAACGTACTGTTCCTCCCCTATTGTCCAATATGACAGAATAAGCaataaggcccagctgtaGTAGGTTCTCTTGTTCTACAGTGGCACAACAAAAGGTAGCTTCAAAGTCCTTACTGTTGCTGTATAGCGGGACGATTCTGAAACAGCGGACAAACTGGTCCACTGTGAACTACAATATCAAATGTCCTTATGATTGTCATATTATTAACATTTAGTTTCAGTTTCACGCTCAGAAACAGGGTTGGTCCATACActtcaatgtttttttaaattactaAATGATACCAGTGGTCCAGTATACTTCGGTTCGGAGCAGGGTTGTGCTAGTATGTTTAGTCTCCAGTTACAACGTGGAGGGTATTCCTCATTCATATTTTCATGAGAATGTCAGGAATGGGCCAAATAAGACTGGGATGGGAGGATTCTAAATGAAACAAGTCCAGAAATATGATAAAAGCAACTCTAAAATAAAACAGTTATCAGACAAAATACATGTACAAACACTAGGTGCAGAATTACTACTATTTACATATGCACAGCTGTCCTTCAAGTCTCCAGTTATAAAAAGAAACGTATATTTAAGACAAATAAAAGATAACACAGCATAAACATGTCAACGCATAACAATCCTGTCTATATATTTATATGCATGTAAACATATATACATATGCATACATGTACatctataaatatatatttaatttacatacatacatttttGAGGATAATGTACATTATCTGGGGGCAGCAGTTGTCTCTCGGGTTTTTCTTTTGGGAACAGGCGGCAACacacccgtacacacacacacacacacagacacataggcaCACatgaaggcacacacacacccacccacacacacagacagacacacatggatgcacttgcgcgcacgcacgcacacacacacacatacacttgcaTGCACACAACCAGACCCACACAGAAATCCACATACACCATCACCAGTCGGCATCCTCCTCTATGTAATAATCAGGGGTGGATGTACCATCAAACAGGCCCGGGTCCATTGACTTGCGCTGCTTTCCCCGAGCAAACACCCGGGACAGGGAGCCCAGACtcatcttctccttcttctttgtCTTACGCTT

Function

NR:

description
PREDICTED: kazrin-like isoform X1

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU695217 False 256 lncRNA 0.53 2 43623596 43673775
TU695216 True 2009 lncRNA 0.40 2 43671731 43673775

Neighbor

gene id symbol gene type direction distance location
si:dkey-183j2.10 LOC106582807 coding upstream 41285 43567660 ~ 43582311 (+)
mon1bb LOC106582805 coding upstream 77779 43536997 ~ 43545817 (+)
LOC110528952 NA coding upstream 94549 43526931 ~ 43529047 (+)
LOC110527818 NA coding upstream 96928 43524687 ~ 43526668 (+)
LOC110527808 ab14b coding upstream 588385 43027924 ~ 43035211 (+)
ppcs ppcs coding downstream 290702 43964477 ~ 43966869 (+)
si:dkey-264d12.5 LOC106582817 coding downstream 328781 44002556 ~ 44035143 (+)
LOC110527834 LOC106582821 coding downstream 412090 44085865 ~ 44092535 (+)
LOC110527839 NA coding downstream 490481 44164248 ~ 44178065 (+)
mmel1 LOC106582826 coding downstream 541759 44215534 ~ 44261277 (+)
G610564 LOC106582806 non-coding upstream 37365 43585248 ~ 43586231 (+)
G610545 NA non-coding upstream 62927 43552330 ~ 43560669 (+)
G610528 LOC106582801 non-coding upstream 108853 43513765 ~ 43514743 (+)
G610517 LOC106582800 non-coding upstream 125871 43495012 ~ 43497725 (+)
G610512 cish non-coding upstream 134612 43486861 ~ 43488984 (+)
G610622 NA non-coding downstream 156063 43829004 ~ 43831880 (+)
G610764 NA non-coding downstream 193427 43867202 ~ 43872623 (+)
G610879 NA non-coding downstream 385332 44059107 ~ 44064534 (+)
G610881 NA non-coding downstream 386593 44060368 ~ 44066058 (+)
G610889 NA non-coding downstream 395867 44069642 ~ 44071873 (+)
G610563 LOC106582806 other upstream 38700 43584020 ~ 43584896 (+)
G610436 NA other upstream 212790 43410391 ~ 43410806 (+)
G609436 NA other upstream 802351 42820956 ~ 42821245 (+)
G608390 LOC106582745 other upstream 1792788 41827211 ~ 41830808 (+)
G607904 NA other upstream 2160427 41462824 ~ 41463169 (+)
G613664 NA other downstream 2604959 46278734 ~ 46279333 (+)
LOC110528958 NA other downstream 2958347 46629591 ~ 46638492 (+)
G615624 NA other downstream 4165613 47839388 ~ 47839722 (+)

Expression


Co-expression Network