G610622


Basic Information

Item Value
gene id G610622
gene name NA
gene type misc
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048571.1
NCBI id CM023225.2
chromosome length 90918291
location 43829004 ~ 43831880 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU695211
atatatatatagttcaattacagttttttttttcaaacatGCTACAAGCACTTGAGTCatatccctctcctctacctcagctGTAAAAGGCAGATGGTCCAGAAGGAACAACAGTGGGGTGAGCATTGTAAACAGGGACAGAATTCCTCTATATAGCACATCATGGGATAGATAGGGACTAATCATAATCAAAAGTACAATACTTTGTCAAAGTATAACATGTAATAGGTCTACATATAGATGACATTGAAGAAGATACACTACCTTCCCAGCCACCCTTGGCTGTAGgtacagaaaaaaaaacagcaatcaaACGACCTTACTGCCTGTTTGCAACTGCAAGGAACATAAGAACTGAAGCAACTTTTCAAGGCCATCCTTATTACTGGGACACAGTGGCTTCTGCTCTCCCCATCTACAGCCATGACTCCAATTATCAAAccttaaacaaaaacaaaaaaaatcctaaCATCATCATGGTGGAACATTTTTTGGGCAATCCTCCAACACACGATCACCGCCGCTACATATTTCAGATGAATGCATTTGATTACATCATACGGGTGAAATCAAGTCTGGGGAACTATTCAAAATTGCTCAATCTACAGGGAGTCTTAAACGAGGGCAATATTCCAACGACTATATTTCACTGACTTTCTGAGGCAACCCAGTTCTCAGTCATATGTAATAGAGATCTCCACATTCCATTCTTCACATTTGAACCCAAATCATTCCAAGGATTCGTAGCGATCAAATCAAAACAGTTTGGCAGATGTTTTTAAAGTGCTTTCAGACAAGACGACTTATAACTATGTATGACACATCAATAAAATGTGAGCCTCTGAGAAATCCACAATGTCAATAAACTGGATAAGTGgcagtgtccccccccccccccccccacacacacattttcaatgTCATCTTCCCCTATCCCTTCCCAGGGAACTAACTGTCAGAGGTATACGGCTGCATTGTTCTAGTTATCCTCTGATAAGCAACATAAGGAAAACATGCCGGAGAGAAAACAGACATCTCAACTTTGAGATCAAGGGGACAACGGTTGTCAGCCCACACATAAGGTGCAAGCCTACCCATACGCACGTTTGAATGcatatgcatatacacacacacacacacacacacttgggacACGCCGTTTCTGACAAGCCATTTCTACAGTTGAAAACAGTTCCGTTTCATCTTGGCTTCCCGACGAAAATAAAAATCTGCCAATGAAGAGATGTTCCAAAATGTATTCTCAACGGAGCATTGTGTGAAATCAAATATACATATTCATTTGCAAATCATGTGTATTAATCAAAGTAGGCGCAGGACTTAACATGGAGACAAGCAGACAAGGGACAGGTCTCTAGTTCAGCTGGATTCAGCACATGCATTAAGAGACGGAGATGTCGGAGGATTCATCAACCACCAAACAATGGAAAAAACGGAGCGAAAAGAAACACCAGACCAGTTTTGTGAACGGATATAAATGATTGCCATTTGCAATATCAGCTTTTAACCGTTACGGAACCCCAATATCAATGTTACGAGTCAAGTTAtgacacacaatatatatatatatattatatttattcaTTGTCATTAATAGTCTGTTTAATCCTTTCTTTTTTTGTGTTTAAAATCTGCACCCTGTCCCAGGCTCATTTCAcagagagtgatgtagagagaggCGCGCCTCCCTCTGTTCAGCCAACACAGCATGTGATGTGAAGGGAGTAGAGAACAGAGTTCATGTTGTCCTGTAATGGCGCCAGCACACCTCCAGATCCtccggtctgtctctgtgtctgtctctgtgtctgtgtctgtatctgtctgtctgtctgtgtctgtctgtatctgtctgtctgtctgtctgtgtctgtctgtgtctgtctgtgtctgtctgtctgtgtctgtctgtctgtgtctgtctgtctgtgtctgtctgtctgtgtctgtctgtctgtctgtgtctgtctgtctgtctgtgtctgtctgtctgtctgtgtctgtctgtctgtctgtgtctgtctgtctgtctgtctgtgtctgtctgtgtctgtctgtctgtgtctgtctgtctgtgtctgtctgtctgtctgtgtctgtctgtctgtctgtgtctgtctgtctgtgtctgtctgtctgtgtctgtctgtctgtgtctgtctgtctgtgtctgtctgtctgtgtctgtctgtctgtctgtgtctgtctgtctgtgtctgtctgtctgtctgtctgtctgtctgtctgtctgtctgtctgtctgtctgtgtctgtctgtgtctgtctgtctgtctgtctgtctgtgtctgtctgtctgtgtctgtctgtctgtgtctgtctgtctgtgtctgtctgtctgtgtctgtctgtctgtgtctgtctgtctgtgtctgtctgtctgtgtctgtctgtctgtctgatcctTGGGAAGGCCAGAGTTTCTCCTCAGAGGCGAGCCAGCACAGCGACATCCTCCTAGCCGGGGACTTGTTAATCCACAGAATCCACA
>TU695209
TGAGCCTCTGAGAAATCCACAATGTCAATAAACTGGATAAGTGgcagtgtccccccccccccccccccacacacacattttcaatgTCATCTTCCCCTATCCCTTCCCAGGGAACTAACTGTCAGAGGTATACGGCTGCATTGTTCTAGTTATCCTCTGATAAGCAACATAAGGAAAACATGCCGGAGAGAAAACAGACATCTCAACTTTGAGATCAAGGGGACAACGGTTGTCAGCCCACACATAAGGTGCAAGCCTACCCATACGCACGTTTGAATGcatatgcatatacacacacacacacacacacacttgggacACGCCGTTTCTGACAAGCCATTTCTACAGTTGAAAACAGTTCCGTTTCATCTTGGCTTCCCGACGAAAATAAAAATCTGCCAATGAAGAGATGTTCCAAAATGTATTCTCAACGGAGCATTGTGTGAAATCAAATATACATATTCATTTGCAAATCATGTGTATTAATCAAAGTAGGCGCAGGACTTAACATGGAGACAAGCAGACAAGGGACAGGTCTCTAGTTCAGCTGGATTCAGCACATGCATTAAGAGACGGAGATGTCGGAGGATTCATCAACCACCAAACAATGGAAAAAACGGAGCGAAAAGAAACACCAGACCAGTTTTGTGAACGGATATAAATGATTGCCATTTGCAATATCAGCTTTTAACCGTTACGGAACCCCAATATCAATGTTACGAGTCAAGTTAtgacacacaatatatatatatatattatatttattcaTTGTCATTAATAGTCTGTTTAATCCTTTCTTTTTTTGTGTTTAAAATCTGCACCCTGTCCCAGGCTCATTTCAcagagagtgatgtagagagaggCGCGCCTCCCTCTGTTCAGCCAACACAGCATGTGATGTGAAGGGAGTAGAGAACAGAGTTCATGTTGTCCTGTAATGGCGCCAGCACACCTCCAGATCCtccggtctgtctctgtgtctgtctctgtctgtctgtgtctgtctgtctgtctgtctgtctgtgtctgtctgtctgtgtctgtctgtctgtgtctgtctgtctgtgtctgtctgtctgtgtctgtctgtctgtgtctgtctgtctgtgtctgtctgtctgtgtctgtctgtctgtctgatcctTGGGAAGGCCAGAGTTTCTCCTCAGAGGCGAGCCAGCACAGCGACATCCTCCTAGCCGGGGACTTGTTAATCCACAGAATCCACA
>TU695210
ctgtctgtatctgtctgtctgtctgtctgtgtctgtctgtgtctgtctgtctgtgtctgtctgtctgtgtctgtctgtctgtgtctgtctgtctgtgtctgtctgtctgtctgtctgtctgtctgtctgtctgtctgtctgtgtgtgtctgtctgtgtctgtctgtctgtgtctgtctgtctgtgtctgtctgtctgtctgtgtctgtctgtctgtctgtgtctgtctgtctgtgtctgtctgtctgtgtctgtctgtctgtgtctgtctgtctgtgtctgtctgtctgtgtctgtctgtctgtctgtgtctgtctgtctgtgtctgtctgtctgtctgtctgtctgtctgtctgtctgtctgtctgtctgtctgtgtctgtctgtgtctgtctgtctgtctgtctgtctgtgtctgtctgtctgtgtctgtctgtctgtgtctgtctgtctgtgtctgtctgtctgtgtctgtctgtctgtgtctgtctgtctgtgtctgtctgtctgtgtctgtctgtctgtctgatcctTGGGAAGGCCAGAGTTTCTCCTCAGAGGCGAGCCAGCACAGCGACATCCTCCTAGCCGGGGACTTGTTAATCCACAGAATCCACA

Function

GO: NA

KEGG:

id description

RNA

RNA id representative length rna type GC content exon number start site end site
TU695211 False 2527 TUCP 0.44 2 43829004 43831880
TU695209 False 1229 lncRNA 0.45 2 43829838 43831880
TU695210 True 617 lncRNA 0.51 2 43830860 43831880

Neighbor

gene id symbol gene type direction distance location
si:dkey-183j2.10 LOC106582807 coding upstream 247527 43567660 ~ 43582311 (+)
mon1bb LOC106582805 coding upstream 284021 43536997 ~ 43545817 (+)
LOC110528952 NA coding upstream 300791 43526931 ~ 43529047 (+)
LOC110527818 NA coding upstream 303170 43524687 ~ 43526668 (+)
LOC110527808 ab14b coding upstream 794627 43027924 ~ 43035211 (+)
ppcs ppcs coding downstream 132597 43964477 ~ 43966869 (+)
si:dkey-264d12.5 LOC106582817 coding downstream 170676 44002556 ~ 44035143 (+)
LOC110527834 LOC106582821 coding downstream 253985 44085865 ~ 44092535 (+)
LOC110527839 NA coding downstream 332376 44164248 ~ 44178065 (+)
mmel1 LOC106582826 coding downstream 383654 44215534 ~ 44261277 (+)
G610627 NA non-coding upstream 156063 43623596 ~ 43673775 (+)
G610564 LOC106582806 non-coding upstream 243607 43585248 ~ 43586231 (+)
G610545 NA non-coding upstream 269169 43552330 ~ 43560669 (+)
G610528 LOC106582801 non-coding upstream 315095 43513765 ~ 43514743 (+)
G610517 LOC106582800 non-coding upstream 332113 43495012 ~ 43497725 (+)
G610764 NA non-coding downstream 35322 43867202 ~ 43872623 (+)
G610879 NA non-coding downstream 227227 44059107 ~ 44064534 (+)
G610881 NA non-coding downstream 228488 44060368 ~ 44066058 (+)
G610889 NA non-coding downstream 237762 44069642 ~ 44071873 (+)
G610902 LOC106582819 non-coding downstream 247448 44079328 ~ 44080120 (+)
G610563 LOC106582806 other upstream 244942 43584020 ~ 43584896 (+)
G610436 NA other upstream 419032 43410391 ~ 43410806 (+)
G609436 NA other upstream 1008593 42820956 ~ 42821245 (+)
G608390 LOC106582745 other upstream 1999030 41827211 ~ 41830808 (+)
G607904 NA other upstream 2366669 41462824 ~ 41463169 (+)
G613664 NA other downstream 2446854 46278734 ~ 46279333 (+)
LOC110528958 NA other downstream 2800242 46629591 ~ 46638492 (+)
G615624 NA other downstream 4007508 47839388 ~ 47839722 (+)
G617133 NA other downstream 4994947 48826827 ~ 48827227 (+)

Expression


Co-expression Network