G610889


Basic Information

Item Value
gene id G610889
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048571.1
NCBI id CM023225.2
chromosome length 90918291
location 44069642 ~ 44071873 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU695502
GCTCATTCTTACACAAAGTCAATTCACTCTAAGTCTTGACTGCGTGTAATGTGGACATGGTACCACAATGCATGACAAATGAAACAATGATTTTTGTAATAATAGCTAGACCTATATAATCATTTACTATAGAAAAGGGATTAACAGTTAATATAGTTTATTTACAGTATATTCCATGCTATGAAATAAAATGCATAAAACACTGGGTACAGAGAGGCATCAATATGGggcaaataaaatgtaatacaATGATACAAGTTAAGGCTTAAATGTGTATAAAATTAACAAAATGTTAATCATTCATATTTAGACATGAGAGCAAAATGATTACAAGACACAAGGAGGTCTTTTTGTACATAAAGATATCTATACATATTTCATGGGACACCCAAAACAGGAATTTACTCATTTTCAATTTAAACATTAAAGGGCATAAAATAACCTGCAGGACATAGATGCAGAATATATGTACAAATAATCACTCAATAGAAAAGGAGACAGTGAGGAGGCAGCACATGTTGTTCTTCCGCAAAGAGCTTCACAGGTGTTAACCAATGAAAGGCCAGGAGGTATCACATGTTGTAATGTGCTCTGACATTTTCTACCAGACAGCACACCATATCCATCACTGGCAAACACGGGGAAAATATACAAATTAAGAAGGATTACATTCATTTGGTTTCAAACCTGTGGATTCTCGTATTTGTACTTTCTATTCCTATTTCATAGGTAAGATAAAAGGAAATATGAGGAGACCCCTTCCTCATCAACGTCGGCAAACAAATCTTTGTAGCACACAGGCAGAGCTCATGCATGTAATTGACCACATCATGACACATGGTAGAGGGTTCAATCGAGTCACATTGAAATGTTACATATAATGGAATGTGTGTTAAGATATTTCATACATTTCGATTTTAAATGAGTTGTCTGCCTCCATTAAAATCTGGTTGAAAATCTGTCAGGTACTGTAATGGCTTGAACCAACAAATATGTCAGTTCCATTATGGACAATTCTTTGTGCTACATTTCTTCAATACGTCACCAAAATATTTTTACTCTTACATGCTGAGTTTCTACAAATACCAACATCagattcaaaatatattttggtgcTTTTCAGGATTGCCTTAAGCAGTGTCCTTTTTAATACCATGGACAATAATATTAACAAGATGAAAACTACAAGAATAAAACATAGGTATTGGCCCTCCATTTTGAAAGCCTTTTGTGTGCATTGTTGTCTAAAAGACATACTTAAGCGTTATAAAGCTTACATGAGAACAATTCCTTTTTAAGTAACGAAAGTGATGCAAACATTGACATTAGGCGtggcaaaaaaaaaatgcttGGATACATGATTTAGTTGACCTAAACAAAAGGAAGGTAAAGTTCCCAATGTAAATATACTTTAGCAAAGCGTAAAGAGAGAAAAGGACAATATAGAAAAACATAGTAGGAGTGGTCATTTAATGCATTATAACACCTATGGTTAACTTTTTAGCTGCCTGGAGCAATGCCTTTTATTGTCTTAGTAGACTAAAAACCTTTTTGGCCAATACTATGAGGCCTGAAAGTGCTGTAAAATCATCTTTGGATGTCCCAAACATTACCCAATCACACCATATAGATGACAGAAAAAAAAGTCTACCTCTTGATAAGGTACAAATACAGTTTGACCCATTTTTGAAACCCACATGGGgtatacaaacaaacaaataaaagcCAATATCTGGGATTGATTACGCTTAAGTGGAGGGGTGTGACCTTACAGGGAGTTCCTCTATGGGTGTCAGGGGTAGGGTGTCAGGGTAGGGTGTCAGGGGTAGGGTGTCAGGGGTAGGGTGTCAGGGGTAGGGTGTCAGGGTAGGGTGTCAGGGGTAGGGTGTCAGGGGTAGGGTGTCAGGGGTAGGGTGTCAGGGGTAGGGTGTCAGGGGTAGGGTGTCAGGGAAGGGTGTCAGGATAGGGTGTCAGGGGTAGGGTGTCAGGGGTAGGGTGTCAGGGCAGGGTGTCAGGATAGGGTGTTAGGGCGAAGTGCTCAGATGAGGGAGATCCGTATGGGGATACTGGGAGACTCCGTCCTTTGTGGAGAGTGATGGCTCACCAGGTGTTCCACCACCGTGTGTTTGGACATGTGCTTCATAAGGTAGG
>TU695503
GCTCATTCTTACACAAAGTCAATTCACTCTAAGTCTTGACTGCGTGTAATGTGGACATGGTACCACAATGCATGACAAATGAAACAATGATTTTTGTAATAATAGCTAGACCTATATAATCATTTACTATAGAAAAGGGATTAACAGTTAATATAGTTTATTTACAGTATATTCCATGCTATGAAATAAAATGCATAAAACACTGGGTACAGAGAGGCATCAATATGGggcaaataaaatgtaatacaATGATACAAGTTAAGGCTTAAATGTGTATAAAATTAACAAAATGTTAATCATTCATATTTAGACATGAGAGCAAAATGATTACAAGACACAAGGAGGTCTTTTTGTACATAAAGATATCTATACATATTTCATGGGACACCCAAAACAGGAATTTACTCATTTTCAATTTAAACATTAAAGGGCATAAAATAACCTGCAGGACATAGATGCAGAATATATGTACAAATAATCACTCAATAGAAAAGGAGACAGTGAGGAGGCAGCACATGTTGTTCTTCCGCAAAGAGCTTCACAGGTGTTAACCAATGAAAGGCCAGGAGGTATCACATGTTGTAATGTGCTCTGACATTTTCTACCAGACAGCACACCATATCCATCACTGGCAAACACGGGGAAAATATACAAATTAAGAAGGATTACATTCATTTGGTTTCAAACCTGTGGATTCTCGTATTTGTACTTTCTATTCCTATTTCATAGGTAAGATAAAAGGAAATATGAGGAGACCCCTTCCTCATCAACGTCGGCAAACAAATCTTTGTAGCACACAGGCAGAGCTCATGCATGTAATTGACCACATCATGACACATGGTAGAGGGTTCAATCGAGTCACATTGAAATGTTACATATAATGGAATGTGTGTTAAGATATTTCATACATTTCGATTTTAAATGAGTTGTCTGCCTCCATTAAAATCTGGTTGAAAATCTGTCAGGTACTGTAATGGCTTGAACCAACAAATATGTCAGTTCCATTATGGACAATTCTTTGTGCTACATTTCTTCAATACGTCACCAAAATATTTTTACTCTTACATGCTGAGTTTCTACAAATACCAACATCagattcaaaatatattttggtgcTTTTCAGGATTGCCTTAAGCAGTGTCCTTTTTAATACCATGGACAATAATATTAACAAGATGAAAACTACAAGAATAAAACATAGGTATTGGCCCTCCATTTTGAAAGCCTTTTGTGTGCATTGTTGTCTAAAAGACATACTTAAGCGTTATAAAGCTTACATGAGAACAATTCCTTTTTAAGTAACGAAAGTGATGCAAACATTGACATTAGGCGtggcaaaaaaaaaatgcttGGATACATGATTTAGTTGACCTAAACAAAAGGAAGGTAAAGTTCCCAATGTAAATATACTTTAGCAAAGCGTAAAGAGAGAAAAGGACAATATAGAAAAACATAGTAGGAGTGGTCATTTAATGCATTATAACACCTATGGTTAACTTTTTAGCTGCCTGGAGCAATGCCTTTTATTGTCTTAGTAGACTAAAAACCTTTTTGGCCAATACTATGAGGCCTGAAAGTGCTGTAAAATCATCTTTGGATGTCCCAAACATTACCCAATCACACCATATAGATGACAGAAAAAAAAGTCTACCTCTTGATAAGGTACAAATACAGTTTGACCCATTTTTGAAACCCACATGGGgtatacaaacaaacaaataaaagcCAATATCTGGGATTGATTACGCTTAAGTGGAGGGGTGTGACCTTACAGGGAGTTCCTCTATGGGTGTCAGGGGTAGGGTGTCAGGGTAGGGTGTCAGGGGTAGGGTGTCAGGGGTAGGGTGTCAGGGGTAGGGTGTCAGGGTAGGGTGTCAGGGATAGGGTGTCAGGGGTAGGGTGTCAGGGGTAGGGTGTCAGGGCAGGGTGTCAGGATAGGGTGTTAGGGCGAAGTGCTCAGATGAGGGAGATCCGTATGGGGATACTGGGAGACTCCGTCCTTTGTGGAGAGTGATGGCTCACCAGGTGTTCCACCACCGTGTGTTTGGACATGTGCTTCATAAGGTAGG
>TU695504
GCTCATTCTTACACAAAGTCAATTCACTCTAAGTCTTGACTGCGTGTAATGTGGACATGGTACCACAATGCATGACAAATGAAACAATGATTTTTGTAATAATAGCTAGACCTATATAATCATTTACTATAGAAAAGGGATTAACAGTTAATATAGTTTATTTACAGTATATTCCATGCTATGAAATAAAATGCATAAAACACTGGGTACAGAGAGGCATCAATATGGggcaaataaaatgtaatacaATGATACAAGTTAAGGCTTAAATGTGTATAAAATTAACAAAATGTTAATCATTCATATTTAGACATGAGAGCAAAATGATTACAAGACACAAGGAGGTCTTTTTGTACATAAAGATATCTATACATATTTCATGGGACACCCAAAACAGGAATTTACTCATTTTCAATTTAAACATTAAAGGGCATAAAATAACCTGCAGGACATAGATGCAGAATATATGTACAAATAATCACTCAATAGAAAAGGAGACAGTGAGGAGGCAGCACATGTTGTTCTTCCGCAAAGAGCTTCACAGGTGTTAACCAATGAAAGGCCAGGAGGTATCACATGTTGTAATGTGCTCTGACATTTTCTACCAGACAGCACACCATATCCATCACTGGCAAACACGGGGAAAATATACAAATTAAGAAGGATTACATTCATTTGGTTTCAAACCTGTGGATTCTCGTATTTGTACTTTCTATTCCTATTTCATAGGTAAGATAAAAGGAAATATGAGGAGACCCCTTCCTCATCAACGTCGGCAAACAAATCTTTGTAGCACACAGGCAGAGCTCATGCATGTAATTGACCACATCATGACACATGGTAGAGGGTTCAATCGAGTCACATTGAAATGTTACATATAATGGAATGTGTGTTAAGATATTTCATACATTTCGATTTTAAATGAGTTGTCTGCCTCCATTAAAATCTGGTTGAAAATCTGTCAGGTACTGTAATGGCTTGAACCAACAAATATGTCAGTTCCATTATGGACAATTCTTTGTGCTACATTTCTTCAATACGTCACCAAAATATTTTTACTCTTACATGCTGAGTTTCTACAAATACCAACATCagattcaaaatatattttggtgcTTTTCAGGATTGCCTTAAGCAGTGTCCTTTTTAATACCATGGACAATAATATTAACAAGATGAAAACTACAAGAATAAAACATAGGTATTGGCCCTCCATTTTGAAAGCCTTTTGTGTGCATTGTTGTCTAAAAGACATACTTAAGCGTTATAAAGCTTACATGAGAACAATTCCTTTTTAAGTAACGAAAGTGATGCAAACATTGACATTAGGCGtggcaaaaaaaaaatgcttGGATACATGATTTAGTTGACCTAAACAAAAGGAAGGTAAAGTTCCCAATGTAAATATACTTTAGCAAAGCGTAAAGAGAGAAAAGGACAATATAGAAAAACATAGTAGGAGTGGTCATTTAATGCATTATAACACCTATGGTTAACTTTTTAGCTGCCTGGAGCAATGCCTTTTATTGTCTTAGTAGACTAAAAACCTTTTTGGCCAATACTATGAGGCCTGAAAGTGCTGTAAAATCATCTTTGGATGTCCCAAACATTACCCAATCACACCATATAGATGACAGAAAAAAAAGTCTACCTCTTGATAAGGTACAAATACAGTTTGACCCATTTTTGAAACCCACATGGGgtatacaaacaaacaaataaaagcCAATATCTGGGATTGATTACGCTTAAGTGGAGGGGTGTGACCTTACAGGGAGTTCCTCTATGGGTGTCAGGGGTAGGGTGTCAGGGTAGGGTGTCAGGGGTAGGGTGTCAGGGTAGGGTGTCAGGGTAGGGTGTCAGGGGTAGGGTGTCAGGGGTAGGGTGTCAGGGGTAGGGTGTCAGGGGTAGGGTGTCAGGGAAGGGTGTCAGGATAGGGTGTCAGGGGTAGGGTGTCAGGGGTAGGGTGTCAGGGCAGGGTGTCAGGATAGGGTGTTAGGGCGAAGTGCTCAGATGAGGGAGATCCGTATGGGGATACTGGGAGACTCCGTCCTTTGTGGAGAGTGATGGCTCACCAGGTGTTCCACCACCGTGTGTTTGGACATGTGCTTCATAAGGTAGG

Function

NR:

description
unnamed protein product

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU695502 False 2151 lncRNA 0.39 2 44069642 44071873
TU695503 False 2069 lncRNA 0.38 2 44069642 44071873
TU695504 True 2122 lncRNA 0.38 2 44069642 44071873

Neighbor

gene id symbol gene type direction distance location
si:dkey-264d12.5 LOC106582817 coding upstream 34499 44002556 ~ 44035143 (+)
ppcs ppcs coding upstream 102773 43964477 ~ 43966869 (+)
si:dkey-183j2.10 LOC106582807 coding upstream 487331 43567660 ~ 43582311 (+)
mon1bb LOC106582805 coding upstream 523825 43536997 ~ 43545817 (+)
LOC110528952 NA coding upstream 540595 43526931 ~ 43529047 (+)
LOC110527834 LOC106582821 coding downstream 13992 44085865 ~ 44092535 (+)
LOC110527839 NA coding downstream 92383 44164248 ~ 44178065 (+)
mmel1 LOC106582826 coding downstream 143661 44215534 ~ 44261277 (+)
slc45a1 LOC106582828 coding downstream 205047 44276920 ~ 44290303 (+)
LOC110527111 LOC106582832 coding downstream 249766 44321639 ~ 44449234 (+)
G610881 NA non-coding upstream 3584 44060368 ~ 44066058 (+)
G610879 NA non-coding upstream 5108 44059107 ~ 44064534 (+)
G610764 NA non-coding upstream 197019 43867202 ~ 43872623 (+)
G610622 NA non-coding upstream 237762 43829004 ~ 43831880 (+)
G610627 NA non-coding upstream 395867 43623596 ~ 43673775 (+)
G610902 LOC106582819 non-coding downstream 7455 44079328 ~ 44080120 (+)
G610893 NA non-coding downstream 26338 44098211 ~ 44102475 (+)
G610955 miip non-coding downstream 109588 44181461 ~ 44183205 (+)
G610958 NA non-coding downstream 113602 44185475 ~ 44186204 (+)
G610563 LOC106582806 other upstream 484746 43584020 ~ 43584896 (+)
G610436 NA other upstream 658836 43410391 ~ 43410806 (+)
G609436 NA other upstream 1248397 42820956 ~ 42821245 (+)
G613664 NA other downstream 2206861 46278734 ~ 46279333 (+)
LOC110528958 NA other downstream 2560249 46629591 ~ 46638492 (+)
G615624 NA other downstream 3767515 47839388 ~ 47839722 (+)
G617133 NA other downstream 4754954 48826827 ~ 48827227 (+)
tafa4b LOC106583040 other downstream 5500447 49571790 ~ 49620194 (+)

Expression


Co-expression Network