G611080


Basic Information

Item Value
gene id G611080
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048571.1
NCBI id CM023225.2
chromosome length 90918291
location 44439829 ~ 44440157 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU695721
cctctctctcccctgtttcttcactctctccccactctctcccctctttcctccctctctctcccctctctcttctattTCTCCCCTCACtcttctgtttctcccctctctcttctgtttctcccctctcttccctgtttctcccctctctcttctgtttctcccttctctctcccctgtttctcctctctctcttccccgtttctcccctctctctcccccgcttctctcctctctctcccccgtttctctcctctctctcccccgtttctctcctctctctcccccgtttctctcctctctctcccccatttctctcctctctctcc

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU695721 True 329 lncRNA 0.56 1 44439829 44440157

Neighbor

gene id symbol gene type direction distance location
slc45a1 LOC106582828 coding upstream 149526 44276920 ~ 44290303 (+)
mmel1 LOC106582826 coding upstream 178552 44215534 ~ 44261277 (+)
LOC110527839 NA coding upstream 261764 44164248 ~ 44178065 (+)
LOC110527834 LOC106582821 coding upstream 347294 44085865 ~ 44092535 (+)
si:dkey-264d12.5 LOC106582817 coding upstream 404686 44002556 ~ 44035143 (+)
LOC110527112 NA coding downstream 10429 44450586 ~ 44464197 (+)
LOC110527847 LOC106582833 coding downstream 27437 44467594 ~ 44524862 (+)
LOC110528955 LOC105009000 coding downstream 87753 44527910 ~ 44535089 (+)
LOC110527848 LOC106582834 coding downstream 95067 44535224 ~ 44540487 (+)
ift52 ift52 coding downstream 106097 44546254 ~ 44551269 (+)
G611079 NA non-coding upstream 403 44439220 ~ 44439426 (+)
G611078 NA non-coding upstream 1449 44437078 ~ 44438380 (+)
G611077 NA non-coding upstream 3875 44435746 ~ 44435954 (+)
G611076 NA non-coding upstream 9763 44429831 ~ 44430066 (+)
G611043 NA non-coding upstream 90693 44348826 ~ 44349136 (+)
G611081 NA non-coding downstream 719 44440876 ~ 44441442 (+)
G611087 NA non-coding downstream 20700 44460857 ~ 44461181 (+)
G611093 NA non-coding downstream 34212 44474369 ~ 44474614 (+)
G611099 NA non-coding downstream 40528 44480685 ~ 44481102 (+)
G611101 NA non-coding downstream 41527 44481684 ~ 44481963 (+)
G610622 NA other upstream 607949 43829004 ~ 43831880 (+)
G610563 LOC106582806 other upstream 854933 43584020 ~ 43584896 (+)
G610436 NA other upstream 1029023 43410391 ~ 43410806 (+)
G609436 NA other upstream 1618584 42820956 ~ 42821245 (+)
G613664 NA other downstream 1838577 46278734 ~ 46279333 (+)
LOC110528958 NA other downstream 2191965 46629591 ~ 46638492 (+)
G615624 NA other downstream 3399231 47839388 ~ 47839722 (+)
G617133 NA other downstream 4386670 48826827 ~ 48827227 (+)
tafa4b LOC106583040 other downstream 5132163 49571790 ~ 49620194 (+)

Expression


Co-expression Network