G611674


Basic Information

Item Value
gene id G611674
gene name NA
gene type misc
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048571.1
NCBI id CM023225.2
chromosome length 90918291
location 44484855 ~ 44485752 (-)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU696390
GCCCCGTAACCAACGGCGCTACCTGTGCCTGTCTGGGAGCATGGCACCACCCTGCGGGCGCTGTCCTGTACCCAAGCCCAACAGCGCTCCCTGGCGTGTGCCCTCTGCCCCTCTCCTGCCCGCGGCTGAGGGGCTCCCTGTCGGTCCGAGGGCTGCCAGCTCGCCAGCCTCCCCAGTGCCCGCCATCCCAGCGCCACCACTCGCCCAGCTGTGCCACGCTCCGAACCAGCACCCCGTCCACCTCTCGCTTTGCCaccccgtacacacacacacacacacacctaacacacacttacacagctcttacctcacacatacacacactcatgatCAACACCCCTTCCTCCTGTACCACTCCGCTAGTTCGCGCACACACACCTCTACCCTTCAAAGTCCTCAAACCTCAGCTTGCCtatacttcctcctcctcctctgccaaCCGCTTCCTTACTGCCCACACGTAACACTACCCTCACGcttctcctgtcccctccactggaatatctctctctcattcacttgTTTTGTAGCTGACGGACTCCGgggttctc
>TU696391
CTATCCATCCCCCATCTTCTCttactctttccctccatccctccctccctccatacctgagGAAGAGTTGATGAGTGATCCATTGGAGCTGGTTCTGCGGAGCATCCGAAGTCCGTCACTCCAGGAGCGAGACTTGGGCAGGCGCCGTAACAGCCGGCCCAAACGCCTGGACACCTGACCGAAACACGCACTGCCCATATCGCCATCCTCACCCCCCaactccccctctccttcaccacCCACCTCAGCCCTCACACGCAGAGACAAGGATTGAGAAGCTCTTACCTGGCTCACACCCTCACCGCTCTCCCCCGCCTCCCCCGCTCGCTCCCCCTCCTCTACCCGCCGCCCCGTAACCAACGGCGCTACCTGTGCCTGTCTGGGAGCATGGCACCACCCTGCGGGCGCTGTCCTGTACCCAAGCCCAACAGCGCTCCCTGGCGTGTGCCCTCTGCCCCTCTCCTGCCCGCGGCTGAGGGGCTCCCTGTCGGTCCGAGGGCTGCCAGCTCGCCAGCCTCCCCAGTGCCCGCCATCCCAGCGCCACCACTCGCCCAGCTGTGCCACGCTCCGAACCAGCACCCCGTCCACCTCTCGCTTTGCCaccccgtacacacacacacacacacacctaacacacacttacacagctcttacctcacacatacacacactcatgatCAACACCCCTTCCTCCTGTACCACTCCGCTAGTTCGCGCACACACACCTCTACCCTTCAAAGTCCTCAAACCTCAGCTTGCCtatacttcctcctcctcctctgccaaCCGCTTCCTTACTGCCCACACGTAACACTACCCTCACGcttctcctgtcccctccactggaatatctctctctcattcacttgTTTTGTAGCTGACGGACTCCGgggttctc
>TU696393
CTATCCATCCCCCATCTTCTCttactctttccctccatccctccctccctccatacctgagGAAGAGTTGATGAGTGATCCATTGGAGCTGGTTCTGCGGAGCATCCGAAGTCCGTCACTCCAGGAGCGAGACTTGGGCAGGCGCCGTAACAGCCGGCCCAAACGCCTGGACACCTGACCGAAACACGCACTGCCCATATCGCCATCCTCACCCCCCaactccccctctccttcaccacCCACCTCAGCCCTCACACGCAGAGACAAGGATTGAGA

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU696390 False 551 TUCP 0.61 1 44484855 44485405
TU696391 False 898 TUCP 0.61 1 44484855 44485752
TU696393 True 276 lncRNA 0.59 1 44485477 44485752

Neighbor

gene id symbol gene type direction distance location
LOC110527846 LOC106582831 coding downstream 165007 44315503 ~ 44320470 (-)
si:ch211-222l21.1 NA coding downstream 191381 44291263 ~ 44294096 (-)
prxl2b fam213b coding downstream 216172 44261628 ~ 44269305 (-)
LOC110527840 miip coding downstream 301273 44136185 ~ 44184204 (-)
si:dkeyp-61b2.1 LOC106582824 coding downstream 309386 44163371 ~ 44176091 (-)
ghrh LOC106582839 coding upstream 100558 44586310 ~ 44590398 (-)
lbp/bpi-1 lbp/bpi-1 coding upstream 110007 44595759 ~ 44602923 (-)
LOC110527856 LOC106582843 coding upstream 120309 44606061 ~ 44607348 (-)
LOC118965287 LOC106582968 coding upstream 123045 44608797 ~ 44610332 (-)
LOC110527855 LOC106582968 coding upstream 126341 44612093 ~ 44613628 (-)
G611671 NA non-coding downstream 2672 44482578 ~ 44482805 (-)
G611668 NA non-coding downstream 6231 44479045 ~ 44479246 (-)
G611662 NA non-coding downstream 12441 44472783 ~ 44473036 (-)
G611659 LOC106582833 non-coding downstream 16930 44467591 ~ 44468547 (-)
G611657 NA non-coding downstream 20792 44464453 ~ 44464685 (-)
G611676 NA non-coding upstream 2827 44488579 ~ 44488861 (-)
G611677 NA non-coding upstream 4064 44489816 ~ 44490015 (-)
G611680 NA non-coding upstream 7982 44493734 ~ 44494146 (-)
G611681 NA non-coding upstream 12408 44498160 ~ 44498401 (-)
G611584 NA non-coding upstream 18218 44503970 ~ 44504919 (-)
G610570 LOC106582807 other downstream 905513 43579093 ~ 43579964 (-)
LOC110527816 LOC106582802 other downstream 948512 43526691 ~ 43537037 (-)
LOC110527812 LOC106582796 other downstream 1046564 43435578 ~ 43439076 (-)
G610183 NA other downstream 1318157 43127811 ~ 43167320 (-)
G613411 LOC106582852 other upstream 1389213 45874965 ~ 45875700 (-)
LOC110527888 LOC106582868 other upstream 2782571 47260325 ~ 47284791 (-)
G616880 NA other upstream 4001295 48487047 ~ 48529168 (-)
G617624 LOC106582928 other upstream 4698672 49184424 ~ 49186096 (-)
G617632 NA other upstream 4709852 49195604 ~ 49195970 (-)
G610185 NA other downstream 1327766 43151570 ~ 43157089 (-)

Expression


Co-expression Network