G611108


Basic Information

Item Value
gene id G611108
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048571.1
NCBI id CM023225.2
chromosome length 90918291
location 44497827 ~ 44498369 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU695752
cctatggacagagtctcccacctcagctgtagatctctgcagttcatccagagtgatcatgggcctcttggctgatcagtcttcttgtatgagctgaaagtttagagggatggccaggtcttggtagatttgcagtggtctgatactccttccatttcaatattatcgcttgcacagtgctccttgggatgtttaaagcttgggaaatcttttttgtatccaaatccggctttaaacttcttcacaacagtatctcggacctgcctggtgtgttccttgttcttcatgatgctctccgcgcttttaacggacctctgagactatcacagtgtaggtgcatttatacggagacttgattacacacaggtggattgtatttatcatcagtagtcatttaggtcaacattggatcattcagagatcctcactgaacttctggagagtttgctgcactgaaagtaaaagggctgaataattttgcacgcccaatttttcagtttttgatttgttaaaaaagtttgaaatatccaataaatgtcgttc

Function

NR:

description
Tc1-like transporase

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU695752 True 543 lncRNA 0.42 1 44497827 44498369

Neighbor

gene id symbol gene type direction distance location
LOC110527112 NA coding upstream 33630 44450586 ~ 44464197 (+)
LOC110527111 LOC106582832 coding upstream 48593 44321639 ~ 44449234 (+)
slc45a1 LOC106582828 coding upstream 207524 44276920 ~ 44290303 (+)
mmel1 LOC106582826 coding upstream 236550 44215534 ~ 44261277 (+)
LOC110527839 NA coding upstream 319762 44164248 ~ 44178065 (+)
LOC110528955 LOC105009000 coding downstream 29541 44527910 ~ 44535089 (+)
LOC110527848 LOC106582834 coding downstream 36855 44535224 ~ 44540487 (+)
ift52 ift52 coding downstream 47885 44546254 ~ 44551269 (+)
LOC110527850 mybl2 coding downstream 56650 44555019 ~ 44576832 (+)
rpn2 LOC106582837 coding downstream 78778 44577147 ~ 44586594 (+)
G611105 NA non-coding upstream 4819 44492809 ~ 44493008 (+)
G611083 NA non-coding upstream 12421 44484870 ~ 44485406 (+)
G611101 NA non-coding upstream 15864 44481684 ~ 44481963 (+)
G611099 NA non-coding upstream 16725 44480685 ~ 44481102 (+)
G611093 NA non-coding upstream 23213 44474369 ~ 44474614 (+)
G611111 NA non-coding downstream 4385 44502754 ~ 44502972 (+)
G611120 NA non-coding downstream 15378 44513747 ~ 44513980 (+)
G611124 NA non-coding downstream 20391 44518760 ~ 44519012 (+)
LOC110527847 LOC106582833 non-coding downstream 21682 44467594 ~ 44524862 (+)
G611127 NA non-coding downstream 31397 44529766 ~ 44530016 (+)
si:dkey-264d12.5 LOC106582817 other upstream 469599 44002556 ~ 44035143 (+)
G610622 NA other upstream 665947 43829004 ~ 43831880 (+)
G610563 LOC106582806 other upstream 912931 43584020 ~ 43584896 (+)
G610436 NA other upstream 1087021 43410391 ~ 43410806 (+)
G609436 NA other upstream 1676582 42820956 ~ 42821245 (+)
G613664 NA other downstream 1780365 46278734 ~ 46279333 (+)
LOC110528958 NA other downstream 2133753 46629591 ~ 46638492 (+)
G615624 NA other downstream 3341019 47839388 ~ 47839722 (+)
G617133 NA other downstream 4328458 48826827 ~ 48827227 (+)
tafa4b LOC106583040 other downstream 5073951 49571790 ~ 49620194 (+)

Expression


Co-expression Network