G611692 (LOC100136012)



Basic Information


Item Value
gene id G611692
gene name LOC100136012
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information


Item Value
chromosome id NC_048571.1
NCBI id CM023225.2
chromosome length 90918291
location 44518086 ~ 44518337 (-)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence


>TU696412
caagatctcacctcgtggggcatcaatgatcatgaggaaggtgagggatcagcccagaactacacggcaggaccttgtcaatgacctgaagagagctgggaccacagtctcaaagaaaaccattagtaacacactacgccgtcatggattaaaatcctgcagcgcacgcaaggtccccctgctcaagccagcgcatgtccaggcccgtctgaagtttgccaatgaacatctggatgatccagaggaggaatg

Function


NR:

description
unnamed protein product

GO: NA

KEGG: NA

RNA


RNA id representative length rna type GC content exon number start site end site
TU696412 True 252 lncRNA 0.52 1 44518086 44518337

Neighbor


gene id symbol gene type direction distance location
LOC110527846 LOC106582831 coding downstream 197616 44315503 ~ 44320470 (-)
si:ch211-222l21.1 NA coding downstream 223990 44291263 ~ 44294096 (-)
prxl2b fam213b coding downstream 248781 44261628 ~ 44269305 (-)
LOC110527840 miip coding downstream 333882 44136185 ~ 44184204 (-)
si:dkeyp-61b2.1 LOC106582824 coding downstream 341995 44163371 ~ 44176091 (-)
ghrh LOC106582839 coding upstream 67973 44586310 ~ 44590398 (-)
lbp/bpi-1 lbp/bpi-1 coding upstream 77422 44595759 ~ 44602923 (-)
LOC110527856 LOC106582843 coding upstream 87724 44606061 ~ 44607348 (-)
LOC118965287 LOC106582968 coding upstream 90460 44608797 ~ 44610332 (-)
LOC110527855 LOC106582968 coding upstream 93756 44612093 ~ 44613628 (-)
G611583 LOC106582833 non-coding downstream 777 44515866 ~ 44517309 (-)
G611691 NA non-coding downstream 3043 44514765 ~ 44515043 (-)
G611684 NA non-coding downstream 10526 44507334 ~ 44507560 (-)
G611584 NA non-coding downstream 13167 44503970 ~ 44504919 (-)
G611681 NA non-coding downstream 19685 44498160 ~ 44498401 (-)
G611582 NA non-coding upstream 2217 44520554 ~ 44524972 (-)
G611693 NA non-coding upstream 7680 44526017 ~ 44526720 (-)
G611694 NA non-coding upstream 8743 44527080 ~ 44527281 (-)
G611696 NA non-coding upstream 10594 44528931 ~ 44529229 (-)
G611730 NA non-coding upstream 57900 44576237 ~ 44576497 (-)
G611674 NA other downstream 32334 44484855 ~ 44485752 (-)
G610570 LOC106582807 other downstream 938122 43579093 ~ 43579964 (-)
LOC110527816 LOC106582802 other downstream 981121 43526691 ~ 43537037 (-)
LOC110527812 LOC106582796 other downstream 1079173 43435578 ~ 43439076 (-)
G610185 NA other downstream 1360997 43151570 ~ 43157089 (-)
G613411 LOC106582852 other upstream 1356628 45874965 ~ 45875700 (-)
LOC110527888 LOC106582868 other upstream 2749986 47260325 ~ 47284791 (-)
G616880 NA other upstream 3968710 48487047 ~ 48529168 (-)
G617624 LOC106582928 other upstream 4666087 49184424 ~ 49186096 (-)
G617632 NA other upstream 4677267 49195604 ~ 49195970 (-)

Expression



Co-expression Network