G611157


Basic Information

Item Value
gene id G611157
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048571.1
NCBI id CM023225.2
chromosome length 90918291
location 44587596 ~ 44587959 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU695805
GCATAAACAGCCACTACTCACTGTAGCCGTTTTCCCATGATGCTCTGTAGGAATTTCCTGGCTGAGATTTGACCTAGAACCTTCCTGTAGCTGTTGGTAAAGATAGCATCAGCATGTCTTCCTGATCTGAAAGATGGGAGGGAGCACATGATCATTTCATGGATAGATGTGTAGAATTTGAAAGTTCAGTCATTGCCTTGATACCATTTTGTTGTATAACAACAAAAGCTATTTCAGATTTTGGGGTGGCACTGACCGCAGTTCGGCTTTTTGTGTCAAGGGAGTGCTGTTTTCTTTCAGCAGTTGCATGGGATGCTCTATAGAGGTCATCAGGATGGACGTGTCCCTCTGACCAAACCTGGGG

Function

NR:

description
VIP peptides-like

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU695805 True 364 lncRNA 0.45 1 44587596 44587959

Neighbor

gene id symbol gene type direction distance location
rpn2 LOC106582837 coding upstream 1002 44577147 ~ 44586594 (+)
LOC110527850 mybl2 coding upstream 10764 44555019 ~ 44576832 (+)
ift52 ift52 coding upstream 36327 44546254 ~ 44551269 (+)
LOC110527848 LOC106582834 coding upstream 47109 44535224 ~ 44540487 (+)
LOC110528955 LOC105009000 coding upstream 52507 44527910 ~ 44535089 (+)
cdk5rap1 cdk5rap1 coding downstream 3066 44591025 ~ 44595777 (+)
LOC110527113 NA coding downstream 42681 44630640 ~ 44632120 (+)
LOC110527859 LOC106582773 coding downstream 46553 44634512 ~ 44636127 (+)
LOC110527115 LOC106582773 coding downstream 50731 44638690 ~ 44640269 (+)
LOC110527864 LOC106582844 coding downstream 81827 44669786 ~ 44778095 (+)
G611127 NA non-coding upstream 57580 44529766 ~ 44530016 (+)
LOC110527847 LOC106582833 non-coding upstream 62734 44467594 ~ 44524862 (+)
G611124 NA non-coding upstream 68584 44518760 ~ 44519012 (+)
G611120 NA non-coding upstream 73616 44513747 ~ 44513980 (+)
G611111 NA non-coding upstream 84624 44502754 ~ 44502972 (+)
G611161 NA non-coding downstream 2208 44590167 ~ 44590395 (+)
G611750 NA non-coding downstream 41791 44629750 ~ 44629961 (+)
G611811 NA non-coding downstream 191691 44779650 ~ 44780195 (+)
G611958 NA non-coding downstream 195002 44782961 ~ 44783282 (+)
si:dkey-264d12.5 LOC106582817 other upstream 559368 44002556 ~ 44035143 (+)
G610622 NA other upstream 755716 43829004 ~ 43831880 (+)
G610563 LOC106582806 other upstream 1002700 43584020 ~ 43584896 (+)
G610436 NA other upstream 1176790 43410391 ~ 43410806 (+)
G609436 NA other upstream 1766351 42820956 ~ 42821245 (+)
G613664 NA other downstream 1690775 46278734 ~ 46279333 (+)
LOC110528958 NA other downstream 2044163 46629591 ~ 46638492 (+)
G615624 NA other downstream 3251429 47839388 ~ 47839722 (+)
G617133 NA other downstream 4238868 48826827 ~ 48827227 (+)
tafa4b LOC106583040 other downstream 4984361 49571790 ~ 49620194 (+)

Expression


Co-expression Network