Gene
RNA
| Item | Value |
|---|---|
| gene id | G611811 |
| gene name | NA |
| gene type | non-coding |
| species | rainbow trout (Oncorhynchus mykiss) |
| category of species | economic fish |
| Item | Value |
|---|---|
| chromosome id | NC_048571.1 |
| NCBI id | CM023225.2 |
| chromosome length | 90918291 |
| location | 44779650 ~ 44780195 (+) |
| genome version | USDA_OmykA_1.1_2020_rainbow_trout_Genome |
| RNA id | representative | length | rna type | GC content | exon number | start site | end site |
|---|---|---|---|---|---|---|---|
| TU696563 | True | 546 | lncRNA | 0.34 | 1 | 44779650 | 44780195 |
| gene id | symbol | gene type | direction | distance | location |
|---|---|---|---|---|---|
| LOC110527864 | LOC106582844 | coding | upstream | 1555 | 44669786 ~ 44778095 (+) |
| LOC118965288 | NA | coding | upstream | 84348 | 44693791 ~ 44695302 (+) |
| LOC110527115 | LOC106582773 | coding | upstream | 139381 | 44638690 ~ 44640269 (+) |
| LOC110527859 | LOC106582773 | coding | upstream | 143523 | 44634512 ~ 44636127 (+) |
| LOC110527113 | NA | coding | upstream | 147530 | 44630640 ~ 44632120 (+) |
| LOC118965289 | NA | coding | downstream | 89999 | 44870194 ~ 44878900 (+) |
| LOC118965290 | NA | coding | downstream | 575346 | 45355541 ~ 45387473 (+) |
| cntn3b | LOC106582848 | coding | downstream | 638953 | 45419148 ~ 45489247 (+) |
| pdzrn3b | LOC106582849 | coding | downstream | 801638 | 45581833 ~ 45705499 (+) |
| shq1 | shq1 | coding | downstream | 988503 | 45768698 ~ 45809619 (+) |
| G611750 | NA | non-coding | upstream | 149689 | 44629750 ~ 44629961 (+) |
| G611161 | NA | non-coding | upstream | 189255 | 44590167 ~ 44590395 (+) |
| G611157 | NA | non-coding | upstream | 191691 | 44587596 ~ 44587959 (+) |
| G611127 | NA | non-coding | upstream | 249634 | 44529766 ~ 44530016 (+) |
| G611958 | NA | non-coding | downstream | 2766 | 44782961 ~ 44783282 (+) |
| G611976 | NA | non-coding | downstream | 17376 | 44797571 ~ 44797801 (+) |
| G611978 | NA | non-coding | downstream | 19009 | 44799204 ~ 44799519 (+) |
| G611983 | NA | non-coding | downstream | 22922 | 44803117 ~ 44865025 (+) |
| G612021 | NA | non-coding | downstream | 122646 | 44902841 ~ 44910896 (+) |
| si:dkey-264d12.5 | LOC106582817 | other | upstream | 751422 | 44002556 ~ 44035143 (+) |
| G610622 | NA | other | upstream | 947770 | 43829004 ~ 43831880 (+) |
| G610563 | LOC106582806 | other | upstream | 1194754 | 43584020 ~ 43584896 (+) |
| G610436 | NA | other | upstream | 1368844 | 43410391 ~ 43410806 (+) |
| G609436 | NA | other | upstream | 1958405 | 42820956 ~ 42821245 (+) |
| G613664 | NA | other | downstream | 1498539 | 46278734 ~ 46279333 (+) |
| LOC110528958 | NA | other | downstream | 1851927 | 46629591 ~ 46638492 (+) |
| G615624 | NA | other | downstream | 3059193 | 47839388 ~ 47839722 (+) |
| G617133 | NA | other | downstream | 4046632 | 48826827 ~ 48827227 (+) |
| tafa4b | LOC106583040 | other | downstream | 4792125 | 49571790 ~ 49620194 (+) |
