Gene
RNA
| Item | Value |
|---|---|
| gene id | G612479 |
| gene name | NA |
| gene type | non-coding |
| species | rainbow trout (Oncorhynchus mykiss) |
| category of species | economic fish |
| Item | Value |
|---|---|
| chromosome id | NC_048571.1 |
| NCBI id | CM023225.2 |
| chromosome length | 90918291 |
| location | 45183912 ~ 45184116 (+) |
| genome version | USDA_OmykA_1.1_2020_rainbow_trout_Genome |
| RNA id | representative | length | rna type | GC content | exon number | start site | end site |
|---|---|---|---|---|---|---|---|
| TU697262 | True | 205 | lncRNA | 0.36 | 1 | 45183912 | 45184116 |
| gene id | symbol | gene type | direction | distance | location |
|---|---|---|---|---|---|
| LOC118965289 | NA | coding | upstream | 305012 | 44870194 ~ 44878900 (+) |
| LOC110527864 | LOC106582844 | coding | upstream | 405817 | 44669786 ~ 44778095 (+) |
| LOC118965288 | NA | coding | upstream | 488610 | 44693791 ~ 44695302 (+) |
| LOC110527115 | LOC106582773 | coding | upstream | 543643 | 44638690 ~ 44640269 (+) |
| LOC110527859 | LOC106582773 | coding | upstream | 547785 | 44634512 ~ 44636127 (+) |
| LOC118965290 | NA | coding | downstream | 171425 | 45355541 ~ 45387473 (+) |
| cntn3b | LOC106582848 | coding | downstream | 235032 | 45419148 ~ 45489247 (+) |
| pdzrn3b | LOC106582849 | coding | downstream | 397717 | 45581833 ~ 45705499 (+) |
| shq1 | shq1 | coding | downstream | 584582 | 45768698 ~ 45809619 (+) |
| LOC110527873 | LOC106582852 | coding | downstream | 659047 | 45843163 ~ 45883401 (+) |
| G612472 | NA | non-coding | upstream | 3955 | 45179274 ~ 45179957 (+) |
| G612337 | NA | non-coding | upstream | 103484 | 45080141 ~ 45080428 (+) |
| G612310 | NA | non-coding | upstream | 127085 | 45056606 ~ 45056827 (+) |
| G612303 | NA | non-coding | upstream | 135226 | 45048448 ~ 45048686 (+) |
| G612294 | NA | non-coding | upstream | 141686 | 45041936 ~ 45042226 (+) |
| G612493 | NA | non-coding | downstream | 7683 | 45191799 ~ 45191999 (+) |
| G612511 | NA | non-coding | downstream | 22477 | 45206593 ~ 45207194 (+) |
| G612521 | NA | non-coding | downstream | 48883 | 45232999 ~ 45233421 (+) |
| G612531 | NA | non-coding | downstream | 49374 | 45233490 ~ 45233764 (+) |
| G612498 | LOC100380675 | non-coding | downstream | 64814 | 45248930 ~ 45252529 (+) |
| si:dkey-264d12.5 | LOC106582817 | other | upstream | 1155684 | 44002556 ~ 44035143 (+) |
| G610622 | NA | other | upstream | 1352032 | 43829004 ~ 43831880 (+) |
| G610563 | LOC106582806 | other | upstream | 1599016 | 43584020 ~ 43584896 (+) |
| G610436 | NA | other | upstream | 1773106 | 43410391 ~ 43410806 (+) |
| G609436 | NA | other | upstream | 2362667 | 42820956 ~ 42821245 (+) |
| G613664 | NA | other | downstream | 1094618 | 46278734 ~ 46279333 (+) |
| LOC110528958 | NA | other | downstream | 1448006 | 46629591 ~ 46638492 (+) |
| G615624 | NA | other | downstream | 2655272 | 47839388 ~ 47839722 (+) |
| G617133 | NA | other | downstream | 3642711 | 48826827 ~ 48827227 (+) |
| tafa4b | LOC106583040 | other | downstream | 4388204 | 49571790 ~ 49620194 (+) |
