Gene
RNA
| Item | Value |
|---|---|
| gene id | G612575 |
| gene name | NA |
| gene type | non-coding |
| species | rainbow trout (Oncorhynchus mykiss) |
| category of species | economic fish |
| Item | Value |
|---|---|
| chromosome id | NC_048571.1 |
| NCBI id | CM023225.2 |
| chromosome length | 90918291 |
| location | 45206591 ~ 45207245 (-) |
| genome version | USDA_OmykA_1.1_2020_rainbow_trout_Genome |
| description |
|---|
| putative transposase |
| RNA id | representative | length | rna type | GC content | exon number | start site | end site |
|---|---|---|---|---|---|---|---|
| TU697373 | True | 655 | lncRNA | 0.42 | 1 | 45206591 | 45207245 |
| gene id | symbol | gene type | direction | distance | location |
|---|---|---|---|---|---|
| LOC110527866 | LOC106582846 | coding | downstream | 35185 | 45085520 ~ 45171406 (-) |
| cntn4 | LOC106582845 | coding | downstream | 224940 | 44803009 ~ 44981651 (-) |
| LOC118936679 | LOC106607655 | coding | downstream | 547835 | 44657459 ~ 44658756 (-) |
| LOC110527858 | LOC106582773 | coding | downstream | 576879 | 44627888 ~ 44629712 (-) |
| LOC110527861 | LOC106582773 | coding | downstream | 581910 | 44623094 ~ 44624681 (-) |
| chl1b | LOC100380675 | coding | upstream | 29628 | 45236873 ~ 45312977 (-) |
| ppp4r2b | LOC106582851 | coding | upstream | 518067 | 45725312 ~ 45731514 (-) |
| LOC110527871 | LOC106582850 | coding | upstream | 527112 | 45734357 ~ 45750837 (-) |
| gpr27 | LOC106582853 | coding | upstream | 762185 | 45969430 ~ 45972012 (-) |
| LOC110528957 | LOC106565741 | coding | upstream | 1110284 | 46317529 ~ 46333627 (-) |
| G612573 | NA | non-coding | downstream | 1000 | 45205340 ~ 45205591 (-) |
| G612571 | NA | non-coding | downstream | 2579 | 45203804 ~ 45204012 (-) |
| G612494 | NA | non-coding | downstream | 14702 | 45191661 ~ 45191889 (-) |
| G612474 | NA | non-coding | downstream | 26943 | 45179238 ~ 45179648 (-) |
| G612326 | NA | non-coding | downstream | 136943 | 45069416 ~ 45069648 (-) |
| G612584 | NA | non-coding | upstream | 10456 | 45217701 ~ 45217946 (-) |
| G612585 | NA | non-coding | upstream | 10884 | 45218129 ~ 45218358 (-) |
| G612570 | NA | non-coding | upstream | 27342 | 45234587 ~ 45234986 (-) |
| G612634 | NA | non-coding | upstream | 108230 | 45315475 ~ 45315703 (-) |
| G612638 | NA | non-coding | upstream | 112334 | 45319579 ~ 45319804 (-) |
| G611674 | NA | other | downstream | 720839 | 44484855 ~ 44485752 (-) |
| G610570 | LOC106582807 | other | downstream | 1626627 | 43579093 ~ 43579964 (-) |
| LOC110527816 | LOC106582802 | other | downstream | 1669626 | 43526691 ~ 43537037 (-) |
| LOC110527812 | LOC106582796 | other | downstream | 1767678 | 43435578 ~ 43439076 (-) |
| G610185 | NA | other | downstream | 2049502 | 43151570 ~ 43157089 (-) |
| G613411 | LOC106582852 | other | upstream | 667720 | 45874965 ~ 45875700 (-) |
| LOC110527888 | LOC106582868 | other | upstream | 2061078 | 47260325 ~ 47284791 (-) |
| G616880 | NA | other | upstream | 3279802 | 48487047 ~ 48529168 (-) |
| G617624 | LOC106582928 | other | upstream | 3977179 | 49184424 ~ 49186096 (-) |
| G617632 | NA | other | upstream | 3988359 | 49195604 ~ 49195970 (-) |
