G612663


Basic Information

Item Value
gene id G612663
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048571.1
NCBI id CM023225.2
chromosome length 90918291
location 45340395 ~ 45340652 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU697461
gcatcgtgaagaaggcgcagcagcgcctcttcaacctcatgaggctgaagaaatccggcttgtcaccaaaagcactcacaaacttctacagatgcacaatcgagagcatcctgtcgggctgtatcaccgcctggtacggcaagcgctccacccacaaccgtaaggctctccagagggtagtgaggtctgcacaacgcatcaccaggggcaaactacctgccctccaggacacctacaccacccgatgtcacaggaagg

Function

NR:

description
unnamed protein product

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU697461 True 258 lncRNA 0.57 1 45340395 45340652

Neighbor

gene id symbol gene type direction distance location
LOC118965289 NA coding upstream 461495 44870194 ~ 44878900 (+)
LOC110527864 LOC106582844 coding upstream 562300 44669786 ~ 44778095 (+)
LOC118965288 NA coding upstream 645093 44693791 ~ 44695302 (+)
LOC110527115 LOC106582773 coding upstream 700126 44638690 ~ 44640269 (+)
LOC110527859 LOC106582773 coding upstream 704268 44634512 ~ 44636127 (+)
LOC118965290 NA coding downstream 14889 45355541 ~ 45387473 (+)
cntn3b LOC106582848 coding downstream 78496 45419148 ~ 45489247 (+)
pdzrn3b LOC106582849 coding downstream 241181 45581833 ~ 45705499 (+)
shq1 shq1 coding downstream 428046 45768698 ~ 45809619 (+)
LOC110527873 LOC106582852 coding downstream 502511 45843163 ~ 45883401 (+)
G612647 NA non-coding upstream 12045 45327957 ~ 45328350 (+)
G612537 NA non-coding upstream 71637 45262138 ~ 45268758 (+)
G612498 LOC100380675 non-coding upstream 87866 45248930 ~ 45252529 (+)
G612531 NA non-coding upstream 106631 45233490 ~ 45233764 (+)
G612521 NA non-coding upstream 106974 45232999 ~ 45233421 (+)
G612677 NA non-coding downstream 9040 45349692 ~ 45349898 (+)
G612680 NA non-coding downstream 10301 45350953 ~ 45351253 (+)
G612741 NA non-coding downstream 54298 45394950 ~ 45395293 (+)
si:dkey-264d12.5 LOC106582817 other upstream 1312167 44002556 ~ 44035143 (+)
G610622 NA other upstream 1508515 43829004 ~ 43831880 (+)
G610563 LOC106582806 other upstream 1755499 43584020 ~ 43584896 (+)
G610436 NA other upstream 1929589 43410391 ~ 43410806 (+)
G609436 NA other upstream 2519150 42820956 ~ 42821245 (+)
G613664 NA other downstream 938082 46278734 ~ 46279333 (+)
LOC110528958 NA other downstream 1291470 46629591 ~ 46638492 (+)
G615624 NA other downstream 2498736 47839388 ~ 47839722 (+)
G617133 NA other downstream 3486175 48826827 ~ 48827227 (+)
tafa4b LOC106583040 other downstream 4231668 49571790 ~ 49620194 (+)

Expression


Co-expression Network