G612677


Basic Information

Item Value
gene id G612677
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048571.1
NCBI id CM023225.2
chromosome length 90918291
location 45349692 ~ 45349898 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU697475
ACTTTTTACTGTGTACCAATTATCTACTATTAATATCCACTATCCAGAGGTAGATTTATTGCAGTGCGTGTTTGATTGATTTGGCATATGGATAGAAACTCTTCCACCTCTTCAGAGAAACTAATACTGGATCattcttaaaggtccaatgcagccattttgtaTCCAAACGTCAAATGTTTTCtgagtaacaattaagtaccttac

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU697475 True 207 lncRNA 0.35 1 45349692 45349898

Neighbor

gene id symbol gene type direction distance location
LOC118965289 NA coding upstream 470792 44870194 ~ 44878900 (+)
LOC110527864 LOC106582844 coding upstream 571597 44669786 ~ 44778095 (+)
LOC118965288 NA coding upstream 654390 44693791 ~ 44695302 (+)
LOC110527115 LOC106582773 coding upstream 709423 44638690 ~ 44640269 (+)
LOC110527859 LOC106582773 coding upstream 713565 44634512 ~ 44636127 (+)
LOC118965290 NA coding downstream 5643 45355541 ~ 45387473 (+)
cntn3b LOC106582848 coding downstream 69250 45419148 ~ 45489247 (+)
pdzrn3b LOC106582849 coding downstream 231935 45581833 ~ 45705499 (+)
shq1 shq1 coding downstream 418800 45768698 ~ 45809619 (+)
LOC110527873 LOC106582852 coding downstream 493265 45843163 ~ 45883401 (+)
G612663 NA non-coding upstream 9040 45340395 ~ 45340652 (+)
G612647 NA non-coding upstream 21342 45327957 ~ 45328350 (+)
G612537 NA non-coding upstream 80934 45262138 ~ 45268758 (+)
G612498 LOC100380675 non-coding upstream 97163 45248930 ~ 45252529 (+)
G612531 NA non-coding upstream 115928 45233490 ~ 45233764 (+)
G612680 NA non-coding downstream 1055 45350953 ~ 45351253 (+)
G612741 NA non-coding downstream 45052 45394950 ~ 45395293 (+)
G613087 NA non-coding downstream 384459 45734357 ~ 45735901 (+)
si:dkey-264d12.5 LOC106582817 other upstream 1321464 44002556 ~ 44035143 (+)
G610622 NA other upstream 1517812 43829004 ~ 43831880 (+)
G610563 LOC106582806 other upstream 1764796 43584020 ~ 43584896 (+)
G610436 NA other upstream 1938886 43410391 ~ 43410806 (+)
G609436 NA other upstream 2528447 42820956 ~ 42821245 (+)
G613664 NA other downstream 928836 46278734 ~ 46279333 (+)
LOC110528958 NA other downstream 1282224 46629591 ~ 46638492 (+)
G615624 NA other downstream 2489490 47839388 ~ 47839722 (+)
G617133 NA other downstream 3476929 48826827 ~ 48827227 (+)
tafa4b LOC106583040 other downstream 4222422 49571790 ~ 49620194 (+)

Expression


Co-expression Network