Gene
RNA
| Item | Value |
|---|---|
| gene id | G612743 |
| gene name | NA |
| gene type | non-coding |
| species | rainbow trout (Oncorhynchus mykiss) |
| category of species | economic fish |
| Item | Value |
|---|---|
| chromosome id | NC_048571.1 |
| NCBI id | CM023225.2 |
| chromosome length | 90918291 |
| location | 45396039 ~ 45396497 (-) |
| genome version | USDA_OmykA_1.1_2020_rainbow_trout_Genome |
| description |
|---|
| unnamed protein product, partial |
| RNA id | representative | length | rna type | GC content | exon number | start site | end site |
|---|---|---|---|---|---|---|---|
| TU697544 | True | 459 | lncRNA | 0.45 | 1 | 45396039 | 45396497 |
| gene id | symbol | gene type | direction | distance | location |
|---|---|---|---|---|---|
| chl1b | LOC100380675 | coding | downstream | 83062 | 45236873 ~ 45312977 (-) |
| LOC110527866 | LOC106582846 | coding | downstream | 224633 | 45085520 ~ 45171406 (-) |
| cntn4 | LOC106582845 | coding | downstream | 414388 | 44803009 ~ 44981651 (-) |
| LOC118936679 | LOC106607655 | coding | downstream | 737283 | 44657459 ~ 44658756 (-) |
| LOC110527858 | LOC106582773 | coding | downstream | 766327 | 44627888 ~ 44629712 (-) |
| ppp4r2b | LOC106582851 | coding | upstream | 328815 | 45725312 ~ 45731514 (-) |
| LOC110527871 | LOC106582850 | coding | upstream | 337860 | 45734357 ~ 45750837 (-) |
| gpr27 | LOC106582853 | coding | upstream | 572933 | 45969430 ~ 45972012 (-) |
| LOC110528957 | LOC106565741 | coding | upstream | 921032 | 46317529 ~ 46333627 (-) |
| LOC110527878 | LOC106582858 | coding | upstream | 945491 | 46341988 ~ 46374962 (-) |
| G612731 | NA | non-coding | downstream | 6653 | 45389122 ~ 45389386 (-) |
| G612716 | NA | non-coding | downstream | 29856 | 45363598 ~ 45366183 (-) |
| G612666 | NA | non-coding | downstream | 54460 | 45341270 ~ 45341579 (-) |
| G612638 | NA | non-coding | downstream | 76235 | 45319579 ~ 45319804 (-) |
| G612634 | NA | non-coding | downstream | 80336 | 45315475 ~ 45315703 (-) |
| G612891 | NA | non-coding | upstream | 88995 | 45485492 ~ 45489186 (-) |
| G612915 | NA | non-coding | upstream | 113660 | 45510157 ~ 45510426 (-) |
| G613307 | NA | non-coding | upstream | 309089 | 45705586 ~ 45705804 (-) |
| G613410 | NA | non-coding | upstream | 475873 | 45872370 ~ 45900132 (-) |
| G613820 | NA | non-coding | upstream | 729363 | 46125860 ~ 46129320 (-) |
| G611674 | NA | other | downstream | 910287 | 44484855 ~ 44485752 (-) |
| G610570 | LOC106582807 | other | downstream | 1816075 | 43579093 ~ 43579964 (-) |
| LOC110527816 | LOC106582802 | other | downstream | 1859074 | 43526691 ~ 43537037 (-) |
| LOC110527812 | LOC106582796 | other | downstream | 1957126 | 43435578 ~ 43439076 (-) |
| G610185 | NA | other | downstream | 2238950 | 43151570 ~ 43157089 (-) |
| G613411 | LOC106582852 | other | upstream | 478468 | 45874965 ~ 45875700 (-) |
| LOC110527888 | LOC106582868 | other | upstream | 1871826 | 47260325 ~ 47284791 (-) |
| G616880 | NA | other | upstream | 3090550 | 48487047 ~ 48529168 (-) |
| G617624 | LOC106582928 | other | upstream | 3787927 | 49184424 ~ 49186096 (-) |
| G617632 | NA | other | upstream | 3799107 | 49195604 ~ 49195970 (-) |
