Gene
RNA
| Item | Value |
|---|---|
| gene id | G613307 |
| gene name | NA |
| gene type | non-coding |
| species | rainbow trout (Oncorhynchus mykiss) |
| category of species | economic fish |
| Item | Value |
|---|---|
| chromosome id | NC_048571.1 |
| NCBI id | CM023225.2 |
| chromosome length | 90918291 |
| location | 45705586 ~ 45705804 (-) |
| genome version | USDA_OmykA_1.1_2020_rainbow_trout_Genome |
| RNA id | representative | length | rna type | GC content | exon number | start site | end site |
|---|---|---|---|---|---|---|---|
| TU698136 | True | 219 | lncRNA | 0.37 | 1 | 45705586 | 45705804 |
| gene id | symbol | gene type | direction | distance | location |
|---|---|---|---|---|---|
| chl1b | LOC100380675 | coding | downstream | 392609 | 45236873 ~ 45312977 (-) |
| LOC110527866 | LOC106582846 | coding | downstream | 534180 | 45085520 ~ 45171406 (-) |
| cntn4 | LOC106582845 | coding | downstream | 723935 | 44803009 ~ 44981651 (-) |
| LOC118936679 | LOC106607655 | coding | downstream | 1046830 | 44657459 ~ 44658756 (-) |
| LOC110527858 | LOC106582773 | coding | downstream | 1075874 | 44627888 ~ 44629712 (-) |
| ppp4r2b | LOC106582851 | coding | upstream | 19508 | 45725312 ~ 45731514 (-) |
| LOC110527871 | LOC106582850 | coding | upstream | 28553 | 45734357 ~ 45750837 (-) |
| gpr27 | LOC106582853 | coding | upstream | 263626 | 45969430 ~ 45972012 (-) |
| LOC110528957 | LOC106565741 | coding | upstream | 611725 | 46317529 ~ 46333627 (-) |
| LOC110527878 | LOC106582858 | coding | upstream | 636184 | 46341988 ~ 46374962 (-) |
| G612915 | NA | non-coding | downstream | 195160 | 45510157 ~ 45510426 (-) |
| G612891 | NA | non-coding | downstream | 216400 | 45485492 ~ 45489186 (-) |
| G612743 | NA | non-coding | downstream | 309089 | 45396039 ~ 45396497 (-) |
| G612731 | NA | non-coding | downstream | 316200 | 45389122 ~ 45389386 (-) |
| G612716 | NA | non-coding | downstream | 339403 | 45363598 ~ 45366183 (-) |
| G613410 | NA | non-coding | upstream | 166566 | 45872370 ~ 45900132 (-) |
| G613820 | NA | non-coding | upstream | 420056 | 46125860 ~ 46129320 (-) |
| G613821 | NA | non-coding | upstream | 424555 | 46130359 ~ 46139862 (-) |
| G613880 | LOC106582854 | non-coding | upstream | 492038 | 46197842 ~ 46198275 (-) |
| G613881 | NA | non-coding | upstream | 499217 | 46205021 ~ 46209544 (-) |
| G611674 | NA | other | downstream | 1219834 | 44484855 ~ 44485752 (-) |
| G610570 | LOC106582807 | other | downstream | 2125622 | 43579093 ~ 43579964 (-) |
| LOC110527816 | LOC106582802 | other | downstream | 2168621 | 43526691 ~ 43537037 (-) |
| LOC110527812 | LOC106582796 | other | downstream | 2266673 | 43435578 ~ 43439076 (-) |
| G610185 | NA | other | downstream | 2548497 | 43151570 ~ 43157089 (-) |
| G613411 | LOC106582852 | other | upstream | 169161 | 45874965 ~ 45875700 (-) |
| LOC110527888 | LOC106582868 | other | upstream | 1562519 | 47260325 ~ 47284791 (-) |
| G616880 | NA | other | upstream | 2781243 | 48487047 ~ 48529168 (-) |
| G617624 | LOC106582928 | other | upstream | 3478620 | 49184424 ~ 49186096 (-) |
| G617632 | NA | other | upstream | 3489800 | 49195604 ~ 49195970 (-) |
