G613935


Basic Information

Item Value
gene id G613935
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048571.1
NCBI id CM023225.2
chromosome length 90918291
location 46282513 ~ 46343789 (-)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU698803
gtgtcatgtactgtcatgttgtgtcttgtttctgtcctttctcttcaccctgtctccctctgctggtcgtgttaggttaccttttctccccctctttcccccagctgtcccttgtcttctctgactacctcgttcaccccttttcccacctgttccctttttccctctgattaggtctctatatctctctctctttctgctcctgtctttgtcggattcttgtttgtgttagtcatgcctgaaccagactatcgtcatgtttgctgcaaccttgtcctgtcctgtcggaatctgccggtccatctgagcctacctatgtttggttattaaagaagctctgtttacattaattcgc
>TU698804
AAGTATCTATtgtcatgtactgtcatgttgtgtcttgtttctgtcctttctcttcaccctgtctccctctgctggtcgtgttaggttaccttttctccccctctttcccccagctgtcccttgtcttctctgactacctcgttcaccccttttcccacctgttccctttttccctctgattaggtctctatatctctctctctttctgctcctgtctttgtcggattcttgtttgtgttagtcatgcctgaaccagactatcgtcatgtttgctgcaaccttgtcctgtcctgtcggaatctgccggtccatctgagcctacctatgtttggttattaaagaagctctgtttacattaattcgcttttgggtcctcattcacgcaccgtaacagaagaatccgac

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU698803 False 355 lncRNA 0.47 2 46282513 46286273
TU698804 True 405 lncRNA 0.46 2 46285878 46343789

Neighbor

gene id symbol gene type direction distance location
gpr27 LOC106582853 coding downstream 310501 45969430 ~ 45972012 (-)
LOC110527871 LOC106582850 coding downstream 531676 45734357 ~ 45750837 (-)
ppp4r2b LOC106582851 coding downstream 550999 45725312 ~ 45731514 (-)
chl1b LOC100380675 coding downstream 969536 45236873 ~ 45312977 (-)
LOC110527866 LOC106582846 coding downstream 1111107 45085520 ~ 45171406 (-)
praf3 praf3 coding upstream 113226 46457015 ~ 46460324 (-)
LOC110527887 LOC106582866 coding upstream 701529 47045318 ~ 47141560 (-)
LOC110528959 LOC106582867 coding upstream 801116 47144905 ~ 47146014 (-)
LOC110527888 LOC106582868 coding upstream 916536 47260325 ~ 47284791 (-)
LOC110527117 LOC106565757 coding upstream 945701 47289490 ~ 47294719 (-)
G613934 NA non-coding downstream 417 46281884 ~ 46282096 (-)
G613932 NA non-coding downstream 3357 46278721 ~ 46279156 (-)
G613913 NA non-coding downstream 28639 46253479 ~ 46253874 (-)
G613911 NA non-coding downstream 32363 46249913 ~ 46250150 (-)
G613881 NA non-coding downstream 72969 46205021 ~ 46209544 (-)
G614020 NA non-coding upstream 38143 46381932 ~ 46382225 (-)
G614156 NA non-coding upstream 86478 46430267 ~ 46430496 (-)
G614160 NA non-coding upstream 95734 46439523 ~ 46439754 (-)
G614162 NA non-coding upstream 97379 46441168 ~ 46441439 (-)
G614165 NA non-coding upstream 106653 46450442 ~ 46451846 (-)
G613411 LOC106582852 other downstream 406813 45874965 ~ 45875700 (-)
G611674 NA other downstream 1796761 44484855 ~ 44485752 (-)
G610570 LOC106582807 other downstream 2702549 43579093 ~ 43579964 (-)
LOC110527816 LOC106582802 other downstream 2745548 43526691 ~ 43537037 (-)
LOC110527812 LOC106582796 other downstream 2843600 43435578 ~ 43439076 (-)
G616880 NA other upstream 2143258 48487047 ~ 48529168 (-)
G617624 LOC106582928 other upstream 2840635 49184424 ~ 49186096 (-)
G617632 NA other upstream 2851815 49195604 ~ 49195970 (-)
mustn1b mstn1 other upstream 2951466 49295040 ~ 49297305 (-)

Expression


Co-expression Network