G614182


Basic Information

Item Value
gene id G614182
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048571.1
NCBI id CM023225.2
chromosome length 90918291
location 46466943 ~ 46468878 (-)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU699063
TTCCTAAATCATGGTGTTTTTTTGTCCTGGTTTCATGAGGAATCACCCAAAACCTTCATTAAATAGCCTAAATATTTCACCGGAGAAACCACACTATACACAAGCTGCTTTCACCCTCAAGCCATTTGATGAGTCATTCTCAAAACAAAATGGAAAATTCCTGGATTAACGTTGTTTTTTTTCGCCCCACAAAGACCGCCTTGCTGAGATATGATTATGGGCCATTTAAACCAATCCCACATTACTCATTAGACTTTTGTTGCTCTAATCTCACCAAGCACCATTTTGAGAATTGGCAAACTATCCAGTTTGACTCATTGTAAACTGGATAGTTTGCCAATTCTCAATGGTGCTTGGTGAGATTAGAGCAATGAAAGGCTAATGATTAATGTGGGATTGGTTTAACTGTTCCATAATCATATCTCAGAAAGGTGGTCTTCTTTGACCAATGTATGGGGAGAAAGGTGGTCTCCCCACACCAATGTATGGGGAGGAAAAAAAAGTTAATCCAGATATTTTCTAttttgttttgagaatgacacatcaAATGGCTTTAGGTTGAAAGCAGCTTGTGTCGCGTGTTTTCTCCGATTGAACATTTAGGCTATTTAATAATGCTGAGCGAATAACCAACATTTAAAAGGGAGGTTTTggttattaaacaactaattg

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU699063 True 672 lncRNA 0.38 3 46466943 46468878

Neighbor

gene id symbol gene type direction distance location
praf3 praf3 coding downstream 6619 46457015 ~ 46460324 (-)
LOC110527878 LOC106582858 coding downstream 91981 46341988 ~ 46374962 (-)
LOC110528957 LOC106565741 coding downstream 133316 46317529 ~ 46333627 (-)
gpr27 LOC106582853 coding downstream 494931 45969430 ~ 45972012 (-)
LOC110527871 LOC106582850 coding downstream 716106 45734357 ~ 45750837 (-)
LOC110527887 LOC106582866 coding upstream 576440 47045318 ~ 47141560 (-)
LOC110528959 LOC106582867 coding upstream 676027 47144905 ~ 47146014 (-)
LOC110527888 LOC106582868 coding upstream 791447 47260325 ~ 47284791 (-)
LOC110527117 LOC106565757 coding upstream 820612 47289490 ~ 47294719 (-)
LOC110527890 LOC106582870 coding upstream 833812 47302690 ~ 47337079 (-)
G614169 NA non-coding downstream 13000 46453714 ~ 46453943 (-)
G614165 NA non-coding downstream 15097 46450442 ~ 46451846 (-)
G614162 NA non-coding downstream 25504 46441168 ~ 46441439 (-)
G614160 NA non-coding downstream 27189 46439523 ~ 46439754 (-)
G614156 NA non-coding downstream 36447 46430267 ~ 46430496 (-)
G614184 NA non-coding upstream 2745 46471623 ~ 46472288 (-)
G614185 NA non-coding upstream 4087 46472965 ~ 46473809 (-)
G614436 NA non-coding upstream 74073 46542951 ~ 46543226 (-)
G614456 NA non-coding upstream 96986 46565864 ~ 46566067 (-)
G614460 NA non-coding upstream 101580 46570458 ~ 46570690 (-)
G613411 LOC106582852 other downstream 591243 45874965 ~ 45875700 (-)
G611674 NA other downstream 1981191 44484855 ~ 44485752 (-)
G610570 LOC106582807 other downstream 2886979 43579093 ~ 43579964 (-)
LOC110527816 LOC106582802 other downstream 2929978 43526691 ~ 43537037 (-)
LOC110527812 LOC106582796 other downstream 3028030 43435578 ~ 43439076 (-)
G616880 NA other upstream 2018169 48487047 ~ 48529168 (-)
G617624 LOC106582928 other upstream 2715546 49184424 ~ 49186096 (-)
G617632 NA other upstream 2726726 49195604 ~ 49195970 (-)
mustn1b mstn1 other upstream 2826377 49295040 ~ 49297305 (-)

Expression


Co-expression Network