G614038 (LOC100136012)


Basic Information

Item Value
gene id G614038
gene name LOC100136012
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048571.1
NCBI id CM023225.2
chromosome length 90918291
location 46470037 ~ 46470483 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU698918
ccagatggtcattggcaaacttcagacgggcctggacatgcgctggcttgagcagggggaccttgcatgcgctgcaggattttaatccatgacggcgtagtgtgttactaatggttttctttgagactatggtcccagctctcttcaggtcattgaccaggtcctgccgtgtagttctgggctgatccctcaccttcctcatgatcattgatgccccacgaggtgagatcttgcatggagccccagactgagggtgattgaccatcatcttgaacttcttccattttctaataacaatatttgttgccttctcaccaagctgcttgcctattgtcctgtagcccatcccagccttgtgcaggtctacaattttatctctgatatccttacacagctctctggtcttggccattgtggagaggttggagtctgtttgattgagtatgt

Function

NR:

description
unnamed protein product, partial

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU698918 True 447 lncRNA 0.49 1 46470037 46470483

Neighbor

gene id symbol gene type direction distance location
LOC110527880 NA coding upstream 1950 46461710 ~ 46468087 (+)
LOC110527879 LOC106582859 coding upstream 18103 46388958 ~ 46451934 (+)
LOC110527877 LOC106582857 coding upstream 128067 46338813 ~ 46341970 (+)
foxp1b LOC106582854 coding upstream 260484 45997787 ~ 46209553 (+)
LOC110527875 NA coding upstream 472918 45992287 ~ 45997119 (+)
LOC110527881 LOC106582781 coding downstream 7861 46478344 ~ 46479954 (+)
LOC110527882 LOC106582861 coding downstream 113282 46583765 ~ 46596389 (+)
LOC110528958 NA coding downstream 159108 46629591 ~ 46638492 (+)
LOC118965406 NA coding downstream 163731 46634214 ~ 46634266 (+)
itpr1b LOC106582863 coding downstream 189842 46660325 ~ 46800771 (+)
G614075 NA non-coding upstream 28121 46441691 ~ 46441916 (+)
G614074 NA non-coding upstream 29230 46440516 ~ 46440807 (+)
G614067 NA non-coding upstream 41182 46428558 ~ 46428855 (+)
G614063 NA non-coding upstream 47434 46422314 ~ 46422603 (+)
G614004 NA non-coding upstream 99043 46370772 ~ 46370994 (+)
G614083 NA non-coding downstream 439 46470922 ~ 46471113 (+)
G614237 NA non-coding downstream 53352 46523835 ~ 46524124 (+)
G614258 NA non-coding downstream 75335 46545818 ~ 46546118 (+)
G614277 NA non-coding downstream 96835 46567318 ~ 46567677 (+)
G614278 NA non-coding downstream 99402 46569885 ~ 46570304 (+)
G613664 NA other upstream 190704 46278734 ~ 46279333 (+)
si:dkey-264d12.5 LOC106582817 other upstream 2441809 44002556 ~ 44035143 (+)
G610622 NA other upstream 2638157 43829004 ~ 43831880 (+)
G610563 LOC106582806 other upstream 2885141 43584020 ~ 43584896 (+)
G610436 NA other upstream 3059231 43410391 ~ 43410806 (+)
G615624 NA other downstream 1368905 47839388 ~ 47839722 (+)
G617133 NA other downstream 2356344 48826827 ~ 48827227 (+)
tafa4b LOC106583040 other downstream 3101837 49571790 ~ 49620194 (+)
G618712 LOC106583033 other downstream 3832947 50303430 ~ 50304232 (+)

Expression


Co-expression Network