G614258


Basic Information

Item Value
gene id G614258
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048571.1
NCBI id CM023225.2
chromosome length 90918291
location 46545818 ~ 46546118 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU699147
CCCCAGTCAACCTCATTTTCCTCATCACTATGTGTCTCCTGTAGGAAAACTACATATAGccttttctgttttattacttctaataaccaagccctcttattcctgtcccttcccccattaatattgagagaacctacccttagtacctccatatagaaaagagaaaagcagaagaaaccacagagaaaccaaAGAGAAAAAAGACACCCTATGAAGCATGATCATCATCATTGTTTAAATCTTCTCTTATTAACCTGACCACGTTtcccaccaccttttgctgctgcAACAGCAGTAACAC

Function

NR:

description
pol-like protein

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU699147 True 301 lncRNA 0.40 1 46545818 46546118

Neighbor

gene id symbol gene type direction distance location
LOC110527881 LOC106582781 coding upstream 65864 46478344 ~ 46479954 (+)
LOC110527880 NA coding upstream 77731 46461710 ~ 46468087 (+)
LOC110527879 LOC106582859 coding upstream 93884 46388958 ~ 46451934 (+)
LOC110527877 LOC106582857 coding upstream 203848 46338813 ~ 46341970 (+)
foxp1b LOC106582854 coding upstream 336265 45997787 ~ 46209553 (+)
LOC110527882 LOC106582861 coding downstream 37647 46583765 ~ 46596389 (+)
LOC110528958 NA coding downstream 83473 46629591 ~ 46638492 (+)
LOC118965406 NA coding downstream 88096 46634214 ~ 46634266 (+)
itpr1b LOC106582863 coding downstream 114207 46660325 ~ 46800771 (+)
bhlhe40 LOC106582864 coding downstream 260329 46806447 ~ 46810462 (+)
G614237 NA non-coding upstream 21694 46523835 ~ 46524124 (+)
G614083 NA non-coding upstream 74705 46470922 ~ 46471113 (+)
G614038 LOC100136012 non-coding upstream 75335 46470037 ~ 46470483 (+)
G614075 NA non-coding upstream 103902 46441691 ~ 46441916 (+)
G614074 NA non-coding upstream 105011 46440516 ~ 46440807 (+)
G614277 NA non-coding downstream 21200 46567318 ~ 46567677 (+)
G614278 NA non-coding downstream 23767 46569885 ~ 46570304 (+)
G614405 NA non-coding downstream 231144 46777262 ~ 46777720 (+)
G614422 NA non-coding downstream 257407 46803525 ~ 46803816 (+)
G614424 NA non-coding downstream 258904 46805022 ~ 46805250 (+)
G613664 NA other upstream 266485 46278734 ~ 46279333 (+)
si:dkey-264d12.5 LOC106582817 other upstream 2517590 44002556 ~ 44035143 (+)
G610622 NA other upstream 2713938 43829004 ~ 43831880 (+)
G610563 LOC106582806 other upstream 2960922 43584020 ~ 43584896 (+)
G610436 NA other upstream 3135012 43410391 ~ 43410806 (+)
G615624 NA other downstream 1293270 47839388 ~ 47839722 (+)
G617133 NA other downstream 2280709 48826827 ~ 48827227 (+)
tafa4b LOC106583040 other downstream 3026202 49571790 ~ 49620194 (+)
G618712 LOC106583033 other downstream 3757312 50303430 ~ 50304232 (+)

Expression


Co-expression Network