G614405


Basic Information

Item Value
gene id G614405
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048571.1
NCBI id CM023225.2
chromosome length 90918291
location 46777262 ~ 46777720 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU699310
GATGGAAAATGCTTCTGATTGGCTTTGGGGGGGTTGTTTCAAGCACATAGCGAGAAGTGGGCACTATCAGCATGGCCGCCAAATGGTGTGAGGTTTCAAAGTATTTTGATCAAACTGATGAAATTTGACCCATGTGCAATGCAAACTATGCAATATCAAGCTCTCCTATCacagcacAACTAGCTCCATGAGATATCATATGCACAAAGAAACATTCAAAGAAGGGGGC

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU699310 True 229 lncRNA 0.43 2 46777262 46777720

Neighbor

gene id symbol gene type direction distance location
LOC110528958 NA coding upstream 138770 46629591 ~ 46638492 (+)
LOC118965406 NA coding upstream 142996 46634214 ~ 46634266 (+)
LOC110527882 LOC106582861 coding upstream 180873 46583765 ~ 46596389 (+)
LOC110527881 LOC106582781 coding upstream 297308 46478344 ~ 46479954 (+)
LOC110527880 NA coding upstream 309175 46461710 ~ 46468087 (+)
bhlhe40 LOC106582864 coding downstream 28727 46806447 ~ 46810462 (+)
sema3fb LOC106582865 coding downstream 158568 46936288 ~ 47029549 (+)
LOC110527889 LOC100380687 coding downstream 519018 47296738 ~ 47302095 (+)
LOC110527899 LOC106582878 coding downstream 733280 47511000 ~ 47524578 (+)
LOC110527900 LOC106582882 coding downstream 751665 47529385 ~ 47535288 (+)
G614278 NA non-coding upstream 206958 46569885 ~ 46570304 (+)
G614277 NA non-coding upstream 209585 46567318 ~ 46567677 (+)
G614258 NA non-coding upstream 231144 46545818 ~ 46546118 (+)
G614237 NA non-coding upstream 253138 46523835 ~ 46524124 (+)
G614083 NA non-coding upstream 306149 46470922 ~ 46471113 (+)
G614422 NA non-coding downstream 25805 46803525 ~ 46803816 (+)
G614424 NA non-coding downstream 27302 46805022 ~ 46805250 (+)
G614649 NA non-coding downstream 34081 46811801 ~ 46812020 (+)
G614655 NA non-coding downstream 40186 46817906 ~ 46818129 (+)
G614721 NA non-coding downstream 123883 46901603 ~ 46901892 (+)
G613664 NA other upstream 497929 46278734 ~ 46279333 (+)
si:dkey-264d12.5 LOC106582817 other upstream 2749034 44002556 ~ 44035143 (+)
G610622 NA other upstream 2945382 43829004 ~ 43831880 (+)
G610563 LOC106582806 other upstream 3192366 43584020 ~ 43584896 (+)
G615624 NA other downstream 1061668 47839388 ~ 47839722 (+)
G617133 NA other downstream 2049107 48826827 ~ 48827227 (+)
tafa4b LOC106583040 other downstream 2794600 49571790 ~ 49620194 (+)
G618712 LOC106583033 other downstream 3525710 50303430 ~ 50304232 (+)
LOC110527970 LOC106583026 other downstream 4182774 50960494 ~ 51079129 (+)

Expression


Co-expression Network