Gene
RNA
| Item | Value |
|---|---|
| gene id | G614424 |
| gene name | NA |
| gene type | non-coding |
| species | rainbow trout (Oncorhynchus mykiss) |
| category of species | economic fish |
| Item | Value |
|---|---|
| chromosome id | NC_048571.1 |
| NCBI id | CM023225.2 |
| chromosome length | 90918291 |
| location | 46805022 ~ 46805250 (+) |
| genome version | USDA_OmykA_1.1_2020_rainbow_trout_Genome |
| id | description |
|---|
| RNA id | representative | length | rna type | GC content | exon number | start site | end site |
|---|---|---|---|---|---|---|---|
| TU699329 | True | 229 | lncRNA | 0.34 | 1 | 46805022 | 46805250 |
| gene id | symbol | gene type | direction | distance | location |
|---|---|---|---|---|---|
| itpr1b | LOC106582863 | coding | upstream | 4251 | 46660325 ~ 46800771 (+) |
| LOC110528958 | NA | coding | upstream | 166530 | 46629591 ~ 46638492 (+) |
| LOC118965406 | NA | coding | upstream | 170756 | 46634214 ~ 46634266 (+) |
| LOC110527882 | LOC106582861 | coding | upstream | 208633 | 46583765 ~ 46596389 (+) |
| LOC110527881 | LOC106582781 | coding | upstream | 325068 | 46478344 ~ 46479954 (+) |
| bhlhe40 | LOC106582864 | coding | downstream | 1197 | 46806447 ~ 46810462 (+) |
| sema3fb | LOC106582865 | coding | downstream | 131038 | 46936288 ~ 47029549 (+) |
| LOC110527889 | LOC100380687 | coding | downstream | 491488 | 47296738 ~ 47302095 (+) |
| LOC110527899 | LOC106582878 | coding | downstream | 705750 | 47511000 ~ 47524578 (+) |
| LOC110527900 | LOC106582882 | coding | downstream | 724135 | 47529385 ~ 47535288 (+) |
| G614422 | NA | non-coding | upstream | 1206 | 46803525 ~ 46803816 (+) |
| G614405 | NA | non-coding | upstream | 27302 | 46777262 ~ 46777720 (+) |
| G614278 | NA | non-coding | upstream | 234718 | 46569885 ~ 46570304 (+) |
| G614277 | NA | non-coding | upstream | 237345 | 46567318 ~ 46567677 (+) |
| G614258 | NA | non-coding | upstream | 258904 | 46545818 ~ 46546118 (+) |
| G614649 | NA | non-coding | downstream | 6551 | 46811801 ~ 46812020 (+) |
| G614655 | NA | non-coding | downstream | 12656 | 46817906 ~ 46818129 (+) |
| G614721 | NA | non-coding | downstream | 96353 | 46901603 ~ 46901892 (+) |
| G614734 | NA | non-coding | downstream | 113519 | 46918769 ~ 46919067 (+) |
| G614743 | NA | non-coding | downstream | 127967 | 46933217 ~ 46933444 (+) |
| G613664 | NA | other | upstream | 525689 | 46278734 ~ 46279333 (+) |
| si:dkey-264d12.5 | LOC106582817 | other | upstream | 2776794 | 44002556 ~ 44035143 (+) |
| G610622 | NA | other | upstream | 2973142 | 43829004 ~ 43831880 (+) |
| G610563 | LOC106582806 | other | upstream | 3220126 | 43584020 ~ 43584896 (+) |
| G615624 | NA | other | downstream | 1034138 | 47839388 ~ 47839722 (+) |
| G617133 | NA | other | downstream | 2021577 | 48826827 ~ 48827227 (+) |
| tafa4b | LOC106583040 | other | downstream | 2767070 | 49571790 ~ 49620194 (+) |
| G618712 | LOC106583033 | other | downstream | 3498180 | 50303430 ~ 50304232 (+) |
| LOC110527970 | LOC106583026 | other | downstream | 4155244 | 50960494 ~ 51079129 (+) |
