Gene
RNA
| Item | Value |
|---|---|
| gene id | G615178 |
| gene name | NA |
| gene type | non-coding |
| species | rainbow trout (Oncorhynchus mykiss) |
| category of species | economic fish |
| Item | Value |
|---|---|
| chromosome id | NC_048571.1 |
| NCBI id | CM023225.2 |
| chromosome length | 90918291 |
| location | 47210856 ~ 47211478 (-) |
| genome version | USDA_OmykA_1.1_2020_rainbow_trout_Genome |
| description |
|---|
| TC1-like transposase |
| RNA id | representative | length | rna type | GC content | exon number | start site | end site |
|---|---|---|---|---|---|---|---|
| TU700127 | True | 623 | lncRNA | 0.48 | 1 | 47210856 | 47211478 |
| gene id | symbol | gene type | direction | distance | location |
|---|---|---|---|---|---|
| LOC110528959 | LOC106582867 | coding | downstream | 64842 | 47144905 ~ 47146014 (-) |
| LOC110527887 | LOC106582866 | coding | downstream | 69296 | 47045318 ~ 47141560 (-) |
| praf3 | praf3 | coding | downstream | 750532 | 46457015 ~ 46460324 (-) |
| LOC110527878 | LOC106582858 | coding | downstream | 835894 | 46341988 ~ 46374962 (-) |
| LOC110528957 | LOC106565741 | coding | downstream | 877229 | 46317529 ~ 46333627 (-) |
| LOC110527888 | LOC106582868 | coding | upstream | 48847 | 47260325 ~ 47284791 (-) |
| LOC110527117 | LOC106565757 | coding | upstream | 78012 | 47289490 ~ 47294719 (-) |
| LOC110527890 | LOC106582870 | coding | upstream | 91212 | 47302690 ~ 47337079 (-) |
| LOC110527893 | LOC106582872 | coding | upstream | 125757 | 47337235 ~ 47345317 (-) |
| LOC110527892 | LOC106582871 | coding | upstream | 133902 | 47345380 ~ 47357081 (-) |
| G615165 | NA | non-coding | downstream | 7215 | 47203422 ~ 47203641 (-) |
| G615078 | NA | non-coding | downstream | 115920 | 47093998 ~ 47094936 (-) |
| G615050 | NA | non-coding | downstream | 148926 | 47061540 ~ 47061930 (-) |
| G615034 | LOC106582865 | non-coding | downstream | 185792 | 47024405 ~ 47025064 (-) |
| G614951 | NA | non-coding | downstream | 291176 | 46919416 ~ 46919680 (-) |
| G615186 | NA | non-coding | upstream | 3688 | 47215166 ~ 47215444 (-) |
| G615251 | NA | non-coding | upstream | 14321 | 47225799 ~ 47226727 (-) |
| G615254 | NA | non-coding | upstream | 17703 | 47229181 ~ 47229467 (-) |
| G615256 | NA | non-coding | upstream | 19470 | 47230948 ~ 47231154 (-) |
| G616058 | NA | non-coding | upstream | 214374 | 47425852 ~ 47496066 (-) |
| G613411 | LOC106582852 | other | downstream | 1335156 | 45874965 ~ 45875700 (-) |
| G611674 | NA | other | downstream | 2725104 | 44484855 ~ 44485752 (-) |
| G610570 | LOC106582807 | other | downstream | 3630892 | 43579093 ~ 43579964 (-) |
| LOC110527816 | LOC106582802 | other | downstream | 3673891 | 43526691 ~ 43537037 (-) |
| LOC110527812 | LOC106582796 | other | downstream | 3771943 | 43435578 ~ 43439076 (-) |
| G616880 | NA | other | upstream | 1275569 | 48487047 ~ 48529168 (-) |
| G617624 | LOC106582928 | other | upstream | 1972946 | 49184424 ~ 49186096 (-) |
| G617632 | NA | other | upstream | 1984126 | 49195604 ~ 49195970 (-) |
| mustn1b | mstn1 | other | upstream | 2083777 | 49295040 ~ 49297305 (-) |
