G615185


Basic Information

Item Value
gene id G615185
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048571.1
NCBI id CM023225.2
chromosome length 90918291
location 47215067 ~ 47215393 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU700134
taaatacacaacatgtaatggatgggataggataggaagcaggtgtgatggaagacaagacaaaaccaaaggaaaatgaaaagaagatcagtgtgtcacgttctgaccttagttcttttatttaggtctttgttttagtatggtcagggcgtgagttgggtgggttgtctatgttcgtttttctatgttggtttttgagtttggcctggtatggttctcaatcagaggcaggtgtcgttagttgtctctgattgagaatcatacttttccacctgtgtttcatgggtgtttattttctgttctgtgttttgttgcaccgttcaggac

Function

NR:

description
unnamed protein product

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU700134 True 327 lncRNA 0.40 1 47215067 47215393

Neighbor

gene id symbol gene type direction distance location
sema3fb LOC106582865 coding upstream 185518 46936288 ~ 47029549 (+)
bhlhe40 LOC106582864 coding upstream 404605 46806447 ~ 46810462 (+)
itpr1b LOC106582863 coding upstream 414296 46660325 ~ 46800771 (+)
LOC110528958 NA coding upstream 576575 46629591 ~ 46638492 (+)
LOC110527889 LOC100380687 coding downstream 81345 47296738 ~ 47302095 (+)
LOC110527899 LOC106582878 coding downstream 295607 47511000 ~ 47524578 (+)
LOC110527900 LOC106582882 coding downstream 313992 47529385 ~ 47535288 (+)
LOC110527907 LOC106582887 coding downstream 348671 47564064 ~ 47566159 (+)
si:ch211-232b12.5 LOC106582889 coding downstream 406078 47621471 ~ 47639848 (+)
G615174 NA non-coding upstream 5822 47208963 ~ 47209245 (+)
G615172 NA non-coding upstream 7409 47207441 ~ 47207658 (+)
G615161 NA non-coding upstream 13319 47201508 ~ 47201748 (+)
G615153 NA non-coding upstream 23052 47191716 ~ 47192015 (+)
G614841 NA non-coding upstream 120274 47093998 ~ 47094793 (+)
G615199 NA non-coding downstream 6475 47221868 ~ 47222132 (+)
G615209 NA non-coding downstream 12493 47227886 ~ 47228321 (+)
G615212 NA non-coding downstream 15586 47230979 ~ 47231239 (+)
G615214 NA non-coding downstream 17937 47233330 ~ 47233672 (+)
G615216 NA non-coding downstream 22393 47237786 ~ 47238036 (+)
G613664 NA other upstream 935734 46278734 ~ 46279333 (+)
si:dkey-264d12.5 LOC106582817 other upstream 3186839 44002556 ~ 44035143 (+)
G610622 NA other upstream 3383187 43829004 ~ 43831880 (+)
G610563 LOC106582806 other upstream 3630171 43584020 ~ 43584896 (+)
G615624 NA other downstream 623995 47839388 ~ 47839722 (+)
G617133 NA other downstream 1611434 48826827 ~ 48827227 (+)
tafa4b LOC106583040 other downstream 2356927 49571790 ~ 49620194 (+)
G618712 LOC106583033 other downstream 3088037 50303430 ~ 50304232 (+)
LOC110527970 LOC106583026 other downstream 3745101 50960494 ~ 51079129 (+)

Expression


Co-expression Network