G615251


Basic Information

Item Value
gene id G615251
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048571.1
NCBI id CM023225.2
chromosome length 90918291
location 47225799 ~ 47226727 (-)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU700200
tagtaggacagaactctgcaggctatctttgcagtagattgcaacaccgccccctttggcagttctatcttgtctgaaaatgttgtagtttggaattaaaatgtctgaatttttggtggtcttcctaagccaggattcagacacagctagaacatctgggttggcagagtgtgctaaagcagtgaatagaacaaacttagggaggaggcttctaatgttaacatgcatgaaaccaaggctattacggttacagaagtcgtcaaaagagagcgcctggggaataggagtggagctaggcactgcagggcctggattcacctctacatcgccagaggaacataggaggagtagaataagggtgtggctaaaagcaataagaattggtcgtctagaacgtctggaacagagagtaaaaggaggtttctgggggcgataaaatagcatcaaggtacaatgtacagacaaaggtaaggtaggatgtgaatacagtggaggtaaacctaggtattgagtgatgaaaagagagatattgtctctagaaacatcattgaaaccaggagatgtcattgcatgtgtgggtggtggaactaataggttggataaggtatagtgagcaggactagaggctctacagtgaaataagccaataaacactaaccagaacagcaatggacaagacatattgacattaaggagaggcatgcttagtcaagtgatcaaaagggtccagtgagtggagaggttggttgagggtcacggcgatttagacagctacccaggccatcggtagcaagctagcataggatggaggtctgttgttagccacctcttgcgttcggtcagtagattagtggggttccgtgtggtagaggggattaatccaaatcacacaacaacaacaaaaataagaacaatagatatagttatag

Function

NR:

description
unnamed protein product

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU700200 True 929 lncRNA 0.44 1 47225799 47226727

Neighbor

gene id symbol gene type direction distance location
LOC110528959 LOC106582867 coding downstream 79785 47144905 ~ 47146014 (-)
LOC110527887 LOC106582866 coding downstream 84239 47045318 ~ 47141560 (-)
praf3 praf3 coding downstream 765475 46457015 ~ 46460324 (-)
LOC110527878 LOC106582858 coding downstream 850837 46341988 ~ 46374962 (-)
LOC110528957 LOC106565741 coding downstream 892172 46317529 ~ 46333627 (-)
LOC110527888 LOC106582868 coding upstream 33598 47260325 ~ 47284791 (-)
LOC110527117 LOC106565757 coding upstream 62763 47289490 ~ 47294719 (-)
LOC110527890 LOC106582870 coding upstream 75963 47302690 ~ 47337079 (-)
LOC110527893 LOC106582872 coding upstream 110508 47337235 ~ 47345317 (-)
LOC110527892 LOC106582871 coding upstream 118653 47345380 ~ 47357081 (-)
G615186 NA non-coding downstream 10355 47215166 ~ 47215444 (-)
G615178 NA non-coding downstream 14321 47210856 ~ 47211478 (-)
G615165 NA non-coding downstream 22158 47203422 ~ 47203641 (-)
G615078 NA non-coding downstream 130863 47093998 ~ 47094936 (-)
G615050 NA non-coding downstream 163869 47061540 ~ 47061930 (-)
G615254 NA non-coding upstream 2454 47229181 ~ 47229467 (-)
G615256 NA non-coding upstream 4221 47230948 ~ 47231154 (-)
G616058 NA non-coding upstream 199125 47425852 ~ 47496066 (-)
G616112 NA non-coding upstream 314182 47540909 ~ 47541186 (-)
G616162 NA non-coding upstream 420816 47647543 ~ 47749086 (-)
G613411 LOC106582852 other downstream 1350099 45874965 ~ 45875700 (-)
G611674 NA other downstream 2740047 44484855 ~ 44485752 (-)
G610570 LOC106582807 other downstream 3645835 43579093 ~ 43579964 (-)
LOC110527816 LOC106582802 other downstream 3688834 43526691 ~ 43537037 (-)
LOC110527812 LOC106582796 other downstream 3786886 43435578 ~ 43439076 (-)
G616880 NA other upstream 1260320 48487047 ~ 48529168 (-)
G617624 LOC106582928 other upstream 1957697 49184424 ~ 49186096 (-)
G617632 NA other upstream 1968877 49195604 ~ 49195970 (-)
mustn1b mstn1 other upstream 2068528 49295040 ~ 49297305 (-)

Expression


Co-expression Network