G615212


Basic Information

Item Value
gene id G615212
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048571.1
NCBI id CM023225.2
chromosome length 90918291
location 47230979 ~ 47231239 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU700161
agacaggagactctagcAACTCAGGactgacgggagactctagcagctcaggacagggggaaggctctggcagcactggacaggcgggagcacctgtaggcagaagacggagagacagcctggtgcagggggctgccactggagggctggtgcgtggaggtggcactggatagaccggaccgtgcaggcacactggagctcttgagcatcgagcctgcccaaccttacctggttgaatgctcccggtagccaggccagtgc

Function

NR:

description
unnamed protein product

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU700161 True 261 lncRNA 0.63 1 47230979 47231239

Neighbor

gene id symbol gene type direction distance location
sema3fb LOC106582865 coding upstream 201430 46936288 ~ 47029549 (+)
bhlhe40 LOC106582864 coding upstream 420517 46806447 ~ 46810462 (+)
itpr1b LOC106582863 coding upstream 430208 46660325 ~ 46800771 (+)
LOC110528958 NA coding upstream 592487 46629591 ~ 46638492 (+)
LOC110527889 LOC100380687 coding downstream 65499 47296738 ~ 47302095 (+)
LOC110527899 LOC106582878 coding downstream 279761 47511000 ~ 47524578 (+)
LOC110527900 LOC106582882 coding downstream 298146 47529385 ~ 47535288 (+)
LOC110527907 LOC106582887 coding downstream 332825 47564064 ~ 47566159 (+)
si:ch211-232b12.5 LOC106582889 coding downstream 390232 47621471 ~ 47639848 (+)
G615209 NA non-coding upstream 2658 47227886 ~ 47228321 (+)
G615199 NA non-coding upstream 8847 47221868 ~ 47222132 (+)
G615185 NA non-coding upstream 15586 47215067 ~ 47215393 (+)
G615174 NA non-coding upstream 21734 47208963 ~ 47209245 (+)
G615172 NA non-coding upstream 23321 47207441 ~ 47207658 (+)
G615214 NA non-coding downstream 2091 47233330 ~ 47233672 (+)
G615216 NA non-coding downstream 6547 47237786 ~ 47238036 (+)
G615229 NA non-coding downstream 35119 47266358 ~ 47266612 (+)
G615230 NA non-coding downstream 35430 47266669 ~ 47267001 (+)
G615231 NA non-coding downstream 35933 47267172 ~ 47267471 (+)
G613664 NA other upstream 951646 46278734 ~ 46279333 (+)
si:dkey-264d12.5 LOC106582817 other upstream 3202751 44002556 ~ 44035143 (+)
G610622 NA other upstream 3399099 43829004 ~ 43831880 (+)
G610563 LOC106582806 other upstream 3646083 43584020 ~ 43584896 (+)
G615624 NA other downstream 608149 47839388 ~ 47839722 (+)
G617133 NA other downstream 1595588 48826827 ~ 48827227 (+)
tafa4b LOC106583040 other downstream 2341081 49571790 ~ 49620194 (+)
G618712 LOC106583033 other downstream 3072191 50303430 ~ 50304232 (+)
LOC110527970 LOC106583026 other downstream 3729255 50960494 ~ 51079129 (+)

Expression


Co-expression Network