G615229


Basic Information

Item Value
gene id G615229
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048571.1
NCBI id CM023225.2
chromosome length 90918291
location 47266358 ~ 47266612 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU700178
ATATGGTATAATAACAGAGACTAAAAGGTATGGGAGTAGTAGCCTATGTGCATTTGATTGTTGTCTAAAAACACGCAATTAAAAAGCATTCTATGTAGAGTGCTGTACACACTATAATGAGACTGACCCTTGCCAATGATCTGGCAATGCTGGACAATGAGCATGTCTGCTGGGATCAGCACATCCTTCACCTCTTCCAGGAGCTCTGGTCTGAAGCTGGAGATGGAGATCTTCTCAGGGGGTAGGAGGGGGGTG

Function

NR:

description
macrophage-stimulating protein receptor-like

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU700178 True 255 lncRNA 0.45 1 47266358 47266612

Neighbor

gene id symbol gene type direction distance location
sema3fb LOC106582865 coding upstream 236809 46936288 ~ 47029549 (+)
bhlhe40 LOC106582864 coding upstream 455896 46806447 ~ 46810462 (+)
itpr1b LOC106582863 coding upstream 465587 46660325 ~ 46800771 (+)
LOC110528958 NA coding upstream 627866 46629591 ~ 46638492 (+)
LOC110527889 LOC100380687 coding downstream 30126 47296738 ~ 47302095 (+)
LOC110527899 LOC106582878 coding downstream 244388 47511000 ~ 47524578 (+)
LOC110527900 LOC106582882 coding downstream 262773 47529385 ~ 47535288 (+)
LOC110527907 LOC106582887 coding downstream 297452 47564064 ~ 47566159 (+)
si:ch211-232b12.5 LOC106582889 coding downstream 354859 47621471 ~ 47639848 (+)
G615216 NA non-coding upstream 28322 47237786 ~ 47238036 (+)
G615214 NA non-coding upstream 32686 47233330 ~ 47233672 (+)
G615212 NA non-coding upstream 35119 47230979 ~ 47231239 (+)
G615209 NA non-coding upstream 38037 47227886 ~ 47228321 (+)
G615199 NA non-coding upstream 44226 47221868 ~ 47222132 (+)
G615230 NA non-coding downstream 57 47266669 ~ 47267001 (+)
G615231 NA non-coding downstream 560 47267172 ~ 47267471 (+)
G615232 NA non-coding downstream 1397 47268009 ~ 47268217 (+)
G615247 NA non-coding downstream 17894 47284506 ~ 47284753 (+)
G615292 NA non-coding downstream 27934 47294546 ~ 47295000 (+)
G613664 NA other upstream 987025 46278734 ~ 46279333 (+)
si:dkey-264d12.5 LOC106582817 other upstream 3238130 44002556 ~ 44035143 (+)
G610622 NA other upstream 3434478 43829004 ~ 43831880 (+)
G610563 LOC106582806 other upstream 3681462 43584020 ~ 43584896 (+)
G615624 NA other downstream 572776 47839388 ~ 47839722 (+)
G617133 NA other downstream 1560215 48826827 ~ 48827227 (+)
tafa4b LOC106583040 other downstream 2305708 49571790 ~ 49620194 (+)
G618712 LOC106583033 other downstream 3036818 50303430 ~ 50304232 (+)
LOC110527970 LOC106583026 other downstream 3693882 50960494 ~ 51079129 (+)

Expression


Co-expression Network