G615439


Basic Information

Item Value
gene id G615439
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048571.1
NCBI id CM023225.2
chromosome length 90918291
location 47537863 ~ 47538205 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU700403
ctcagtactttgttgaagcacatttggcagcgaatatacagccttgagtcttcctgggtatgaagctacaagcttggtacacctgtatttggggagtttctcccattcttctctgcagatcctctcaagctctgtcaggttggatggggagcaccgctgcacagctattttcaggtctctccagagatgttctatcgggttcaagtccaggctctggctgggccactcaaagacattcagagacttgtcccgatccactcctgtgttgtcttggctgtgtgcttagggtcgttttcctgttggaaggtgaaccgtcgccccagcCTGAGGTGAACATTTCGCC

Function

NR:

description
unnamed protein product, partial

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU700403 True 343 lncRNA 0.51 1 47537863 47538205

Neighbor

gene id symbol gene type direction distance location
LOC110527900 LOC106582882 coding upstream 2575 47529385 ~ 47535288 (+)
LOC110527899 LOC106582878 coding upstream 13285 47511000 ~ 47524578 (+)
LOC110527889 LOC100380687 coding upstream 235768 47296738 ~ 47302095 (+)
sema3fb LOC106582865 coding upstream 508314 46936288 ~ 47029549 (+)
bhlhe40 LOC106582864 coding upstream 727401 46806447 ~ 46810462 (+)
LOC110527907 LOC106582887 coding downstream 25859 47564064 ~ 47566159 (+)
si:ch211-232b12.5 LOC106582889 coding downstream 83266 47621471 ~ 47639848 (+)
LOC110527910 LOC106582895 coding downstream 173325 47711530 ~ 47715289 (+)
LOC110527911 NA coding downstream 217062 47755267 ~ 47774218 (+)
LOC118965382 NA coding downstream 483284 48021489 ~ 48022175 (+)
G615346 LOC106582876 non-coding upstream 53445 47433043 ~ 47484418 (+)
G615345 NA non-coding upstream 55192 47478808 ~ 47482671 (+)
G615353 NA non-coding upstream 120863 47357958 ~ 47417000 (+)
G615347 LOC106582875 non-coding upstream 129730 47407726 ~ 47408133 (+)
G615354 LOC106582875 non-coding upstream 130571 47406768 ~ 47407292 (+)
G615444 NA non-coding downstream 4027 47542232 ~ 47542487 (+)
G615340 NA non-coding downstream 6395 47544600 ~ 47544904 (+)
G615453 NA non-coding downstream 35933 47574138 ~ 47577040 (+)
G615338 NA non-coding downstream 103036 47641241 ~ 47642526 (+)
G615580 NA non-coding downstream 225110 47763315 ~ 47764018 (+)
LOC110528958 NA other upstream 899909 46629591 ~ 46638492 (+)
G613664 NA other upstream 1258530 46278734 ~ 46279333 (+)
si:dkey-264d12.5 LOC106582817 other upstream 3509635 44002556 ~ 44035143 (+)
G610622 NA other upstream 3705983 43829004 ~ 43831880 (+)
G610563 LOC106582806 other upstream 3952967 43584020 ~ 43584896 (+)
G615624 NA other downstream 301183 47839388 ~ 47839722 (+)
G617133 NA other downstream 1288622 48826827 ~ 48827227 (+)
tafa4b LOC106583040 other downstream 2034115 49571790 ~ 49620194 (+)
G618712 LOC106583033 other downstream 2765225 50303430 ~ 50304232 (+)
LOC110527970 LOC106583026 other downstream 3422289 50960494 ~ 51079129 (+)

Expression


Co-expression Network