G615784


Basic Information

Item Value
gene id G615784
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048571.1
NCBI id CM023225.2
chromosome length 90918291
location 48058142 ~ 48058351 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU700799
ACTAAAAGACAAATCTCATAGCCATGATAATTAATGACGACAACATTTCTTTGCCTCAAGTTGTCCTGATGAAATATTTTGTTGTATTGTGTAATCAAACAGAGTAGCTCACTTCCTGTGGGCACaggtgtgtgactgactgactgtgtgtgttgcttAGTGGACACCTACAGTTTCCTACGTGGAGAGGGCAGGGCGGGATTCCTTTAG

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU700799 True 210 lncRNA 0.43 1 48058142 48058351

Neighbor

gene id symbol gene type direction distance location
LOC118965382 NA coding upstream 35967 48021489 ~ 48022175 (+)
LOC110527911 NA coding upstream 283924 47755267 ~ 47774218 (+)
LOC110527910 LOC106582895 coding upstream 342853 47711530 ~ 47715289 (+)
si:ch211-232b12.5 LOC106582889 coding upstream 418294 47621471 ~ 47639848 (+)
LOC110527907 LOC106582887 coding upstream 491983 47564064 ~ 47566159 (+)
LOC110527919 LOC106565791 coding downstream 8572 48066923 ~ 48068196 (+)
LOC110527921 LOC106582906 coding downstream 69609 48127960 ~ 48168204 (+)
LOC110510677 LOC100136421 coding downstream 138432 48196782 ~ 48214546 (+)
LOC110527924 kcnkf coding downstream 219330 48277681 ~ 48282177 (+)
LOC110527925 LOC106582912 coding downstream 412336 48470687 ~ 48714043 (+)
G615774 NA non-coding upstream 8174 48049753 ~ 48049968 (+)
G615771 NA non-coding upstream 11803 48046041 ~ 48046339 (+)
G615770 NA non-coding upstream 12169 48045628 ~ 48045973 (+)
G615748 NA non-coding upstream 48060 48009870 ~ 48010082 (+)
G615652 NA non-coding upstream 174685 47881622 ~ 47883457 (+)
G615787 NA non-coding downstream 5705 48064056 ~ 48064406 (+)
G615800 NA non-coding downstream 16241 48074592 ~ 48075265 (+)
G615834 NA non-coding downstream 72663 48131014 ~ 48131321 (+)
G615792 NA non-coding downstream 75968 48134319 ~ 48162713 (+)
G615843 NA non-coding downstream 111819 48170170 ~ 48170384 (+)
G615624 NA other upstream 218420 47839388 ~ 47839722 (+)
LOC110528958 NA other upstream 1420188 46629591 ~ 46638492 (+)
G613664 NA other upstream 1778809 46278734 ~ 46279333 (+)
si:dkey-264d12.5 LOC106582817 other upstream 4029914 44002556 ~ 44035143 (+)
G610622 NA other upstream 4226262 43829004 ~ 43831880 (+)
G617133 NA other downstream 768476 48826827 ~ 48827227 (+)
tafa4b LOC106583040 other downstream 1513969 49571790 ~ 49620194 (+)
G618712 LOC106583033 other downstream 2245079 50303430 ~ 50304232 (+)
LOC110527970 LOC106583026 other downstream 2902143 50960494 ~ 51079129 (+)
G621650 NA other downstream 4332997 52391348 ~ 52391633 (+)

Expression


Co-expression Network