G615787


Basic Information

Item Value
gene id G615787
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048571.1
NCBI id CM023225.2
chromosome length 90918291
location 48064056 ~ 48064406 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU700802
taaccgatcactgcagctgtacatagtatattggtaaatagcccacccattttcacctacctcattcccatactgtttttatttatttatttttctgctcttttgcacaccaatatctctacctgtacatgaccatctgatcatttatcactccagtgttaatctgcaaaattgtaattattcgcctacctcctcatgccttttgcacacattgtatatagactcccccttttttttttctattgtgttattgacttgttaattgtttactccatgtgtaactctgtgttgtctgttcacactgctatgctttatcttggccaggtcgcagttgcaaatgagaacttgttc

Function

NR:

description
unnamed protein product

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU700802 True 351 lncRNA 0.37 1 48064056 48064406

Neighbor

gene id symbol gene type direction distance location
LOC118965382 NA coding upstream 41881 48021489 ~ 48022175 (+)
LOC110527911 NA coding upstream 289838 47755267 ~ 47774218 (+)
LOC110527910 LOC106582895 coding upstream 348767 47711530 ~ 47715289 (+)
si:ch211-232b12.5 LOC106582889 coding upstream 424208 47621471 ~ 47639848 (+)
LOC110527907 LOC106582887 coding upstream 497897 47564064 ~ 47566159 (+)
LOC110527919 LOC106565791 coding downstream 2517 48066923 ~ 48068196 (+)
LOC110527921 LOC106582906 coding downstream 63554 48127960 ~ 48168204 (+)
LOC110510677 LOC100136421 coding downstream 132377 48196782 ~ 48214546 (+)
LOC110527924 kcnkf coding downstream 213275 48277681 ~ 48282177 (+)
LOC110527925 LOC106582912 coding downstream 406281 48470687 ~ 48714043 (+)
G615784 NA non-coding upstream 5705 48058142 ~ 48058351 (+)
G615774 NA non-coding upstream 14088 48049753 ~ 48049968 (+)
G615771 NA non-coding upstream 17717 48046041 ~ 48046339 (+)
G615770 NA non-coding upstream 18083 48045628 ~ 48045973 (+)
G615748 NA non-coding upstream 53974 48009870 ~ 48010082 (+)
G615800 NA non-coding downstream 10186 48074592 ~ 48075265 (+)
G615834 NA non-coding downstream 66608 48131014 ~ 48131321 (+)
G615792 NA non-coding downstream 69913 48134319 ~ 48162713 (+)
G615843 NA non-coding downstream 105764 48170170 ~ 48170384 (+)
G615848 NA non-coding downstream 112962 48177368 ~ 48177570 (+)
G615624 NA other upstream 224334 47839388 ~ 47839722 (+)
LOC110528958 NA other upstream 1426102 46629591 ~ 46638492 (+)
G613664 NA other upstream 1784723 46278734 ~ 46279333 (+)
si:dkey-264d12.5 LOC106582817 other upstream 4035828 44002556 ~ 44035143 (+)
G610622 NA other upstream 4232176 43829004 ~ 43831880 (+)
G617133 NA other downstream 762421 48826827 ~ 48827227 (+)
tafa4b LOC106583040 other downstream 1507914 49571790 ~ 49620194 (+)
G618712 LOC106583033 other downstream 2239024 50303430 ~ 50304232 (+)
LOC110527970 LOC106583026 other downstream 2896088 50960494 ~ 51079129 (+)
G621650 NA other downstream 4326942 52391348 ~ 52391633 (+)

Expression


Co-expression Network