G615848


Basic Information

Item Value
gene id G615848
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048571.1
NCBI id CM023225.2
chromosome length 90918291
location 48177368 ~ 48177570 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU700867
gggttattttacagtccacctgactgtgctgctgctccagtttcaactattctgccttattattattcgaccatgctggtcatttatgaacatttgaacatcttgaccatgttttgttataatctccacccggcacagccagaagaggactggccaccccacatagcctggttcctctctaggtttcttcctaggttttggcc

Function

NR:

description
unnamed protein product

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU700867 True 203 lncRNA 0.46 1 48177368 48177570

Neighbor

gene id symbol gene type direction distance location
LOC110527921 LOC106582906 coding upstream 9164 48127960 ~ 48168204 (+)
LOC110527919 LOC106565791 coding upstream 109172 48066923 ~ 48068196 (+)
LOC118965382 NA coding upstream 155193 48021489 ~ 48022175 (+)
LOC110527911 NA coding upstream 403150 47755267 ~ 47774218 (+)
LOC110527910 LOC106582895 coding upstream 462079 47711530 ~ 47715289 (+)
LOC110510677 LOC100136421 coding downstream 19213 48196782 ~ 48214546 (+)
LOC110527924 kcnkf coding downstream 100111 48277681 ~ 48282177 (+)
LOC110527925 LOC106582912 coding downstream 293117 48470687 ~ 48714043 (+)
lsm14b LOC106582791 coding downstream 559701 48737271 ~ 48740708 (+)
LOC110527931 LOC106582916 coding downstream 657624 48835194 ~ 48845739 (+)
G615843 NA non-coding upstream 6984 48170170 ~ 48170384 (+)
G615792 NA non-coding upstream 14655 48134319 ~ 48162713 (+)
G615834 NA non-coding upstream 46047 48131014 ~ 48131321 (+)
G615800 NA non-coding upstream 102103 48074592 ~ 48075265 (+)
G615787 NA non-coding upstream 112962 48064056 ~ 48064406 (+)
G615855 NA non-coding downstream 5526 48183096 ~ 48183295 (+)
G615875 NA non-coding downstream 42157 48219727 ~ 48220376 (+)
G616533 NA non-coding downstream 203552 48381122 ~ 48381358 (+)
G616545 NA non-coding downstream 213327 48390897 ~ 48391124 (+)
G615624 NA other upstream 337646 47839388 ~ 47839722 (+)
LOC110528958 NA other upstream 1539414 46629591 ~ 46638492 (+)
G613664 NA other upstream 1898035 46278734 ~ 46279333 (+)
si:dkey-264d12.5 LOC106582817 other upstream 4149140 44002556 ~ 44035143 (+)
G610622 NA other upstream 4345488 43829004 ~ 43831880 (+)
G617133 NA other downstream 649257 48826827 ~ 48827227 (+)
tafa4b LOC106583040 other downstream 1394750 49571790 ~ 49620194 (+)
G618712 LOC106583033 other downstream 2125860 50303430 ~ 50304232 (+)
LOC110527970 LOC106583026 other downstream 2782924 50960494 ~ 51079129 (+)
G621650 NA other downstream 4213778 52391348 ~ 52391633 (+)

Expression


Co-expression Network