Gene
RNA
| Item | Value |
|---|---|
| gene id | G616446 |
| gene name | NA |
| gene type | non-coding |
| species | rainbow trout (Oncorhynchus mykiss) |
| category of species | economic fish |
| Item | Value |
|---|---|
| chromosome id | NC_048571.1 |
| NCBI id | CM023225.2 |
| chromosome length | 90918291 |
| location | 48205659 ~ 48206004 (-) |
| genome version | USDA_OmykA_1.1_2020_rainbow_trout_Genome |
| RNA id | representative | length | rna type | GC content | exon number | start site | end site |
|---|---|---|---|---|---|---|---|
| TU701520 | True | 346 | lncRNA | 0.48 | 1 | 48205659 | 48206004 |
| gene id | symbol | gene type | direction | distance | location |
|---|---|---|---|---|---|
| LOC110527920 | LOC106582905 | coding | downstream | 87574 | 48074448 ~ 48118085 (-) |
| LOC110527918 | LOC106582903 | coding | downstream | 213479 | 47937396 ~ 47992180 (-) |
| LOC110527917 | LOC106582900 | coding | downstream | 269003 | 47881573 ~ 47936656 (-) |
| LOC110527915 | LOC106582901 | coding | downstream | 324595 | 47863997 ~ 47881064 (-) |
| LOC110527914 | LOC106582898 | coding | downstream | 343153 | 47795077 ~ 47862506 (-) |
| LOC110527922 | LOC106582908 | coding | upstream | 8923 | 48214927 ~ 48243655 (-) |
| LOC110527927 | NA | coding | upstream | 521365 | 48727369 ~ 48736334 (-) |
| LOC110527928 | LOC106582913 | coding | upstream | 541492 | 48747496 ~ 48771720 (-) |
| LOC100136282 | LOC106582915 | coding | upstream | 581057 | 48787061 ~ 48803078 (-) |
| LOC110527937 | LOC106582921 | coding | upstream | 791760 | 48997764 ~ 49004836 (-) |
| G616442 | NA | non-coding | downstream | 18439 | 48186889 ~ 48187220 (-) |
| G616440 | NA | non-coding | downstream | 19417 | 48186039 ~ 48186242 (-) |
| G616402 | NA | non-coding | downstream | 74195 | 48131101 ~ 48131464 (-) |
| G616370 | NA | non-coding | downstream | 147027 | 48058427 ~ 48058632 (-) |
| G616364 | NA | non-coding | downstream | 152452 | 48052937 ~ 48053207 (-) |
| G616447 | NA | non-coding | upstream | 248 | 48206252 ~ 48206540 (-) |
| G616543 | NA | non-coding | upstream | 183885 | 48389889 ~ 48390160 (-) |
| G616551 | NA | non-coding | upstream | 188731 | 48394735 ~ 48394959 (-) |
| G616564 | NA | non-coding | upstream | 195645 | 48401649 ~ 48401916 (-) |
| LOC110527888 | LOC106582868 | other | downstream | 935588 | 47260325 ~ 47284791 (-) |
| G613411 | LOC106582852 | other | downstream | 2329959 | 45874965 ~ 45875700 (-) |
| G611674 | NA | other | downstream | 3719907 | 44484855 ~ 44485752 (-) |
| G610570 | LOC106582807 | other | downstream | 4625695 | 43579093 ~ 43579964 (-) |
| LOC110527816 | LOC106582802 | other | downstream | 4668694 | 43526691 ~ 43537037 (-) |
| G616880 | NA | other | upstream | 281043 | 48487047 ~ 48529168 (-) |
| G617624 | LOC106582928 | other | upstream | 978420 | 49184424 ~ 49186096 (-) |
| G617632 | NA | other | upstream | 989600 | 49195604 ~ 49195970 (-) |
| mustn1b | mstn1 | other | upstream | 1089251 | 49295040 ~ 49297305 (-) |
| LOC110527961 | LOC106565835 | other | upstream | 1454031 | 49660022 ~ 49936575 (-) |
