Gene
RNA
| Item | Value |
|---|---|
| gene id | G616533 |
| gene name | NA |
| gene type | non-coding |
| species | rainbow trout (Oncorhynchus mykiss) |
| category of species | economic fish |
| Item | Value |
|---|---|
| chromosome id | NC_048571.1 |
| NCBI id | CM023225.2 |
| chromosome length | 90918291 |
| location | 48381122 ~ 48381358 (+) |
| genome version | USDA_OmykA_1.1_2020_rainbow_trout_Genome |
| RNA id | representative | length | rna type | GC content | exon number | start site | end site |
|---|---|---|---|---|---|---|---|
| TU701613 | True | 237 | lncRNA | 0.38 | 1 | 48381122 | 48381358 |
| gene id | symbol | gene type | direction | distance | location |
|---|---|---|---|---|---|
| LOC110527924 | kcnkf | coding | upstream | 98945 | 48277681 ~ 48282177 (+) |
| LOC110510677 | LOC100136421 | coding | upstream | 166576 | 48196782 ~ 48214546 (+) |
| LOC110527921 | LOC106582906 | coding | upstream | 212918 | 48127960 ~ 48168204 (+) |
| LOC110527919 | LOC106565791 | coding | upstream | 312926 | 48066923 ~ 48068196 (+) |
| LOC118965382 | NA | coding | upstream | 358947 | 48021489 ~ 48022175 (+) |
| LOC110527925 | LOC106582912 | coding | downstream | 89329 | 48470687 ~ 48714043 (+) |
| lsm14b | LOC106582791 | coding | downstream | 355913 | 48737271 ~ 48740708 (+) |
| LOC110527931 | LOC106582916 | coding | downstream | 453836 | 48835194 ~ 48845739 (+) |
| LOC110527932 | LOC106582918 | coding | downstream | 480467 | 48861825 ~ 48874455 (+) |
| cidec | cidec | coding | downstream | 503851 | 48885209 ~ 48896546 (+) |
| G615875 | NA | non-coding | upstream | 160746 | 48219727 ~ 48220376 (+) |
| G615855 | NA | non-coding | upstream | 197827 | 48183096 ~ 48183295 (+) |
| G615848 | NA | non-coding | upstream | 203552 | 48177368 ~ 48177570 (+) |
| G615843 | NA | non-coding | upstream | 210738 | 48170170 ~ 48170384 (+) |
| G616545 | NA | non-coding | downstream | 9539 | 48390897 ~ 48391124 (+) |
| G616550 | NA | non-coding | downstream | 14133 | 48395491 ~ 48395723 (+) |
| G616560 | NA | non-coding | downstream | 18883 | 48400241 ~ 48400505 (+) |
| G616579 | NA | non-coding | downstream | 27951 | 48409309 ~ 48409526 (+) |
| G616603 | NA | non-coding | downstream | 42905 | 48424263 ~ 48424727 (+) |
| G615624 | NA | other | upstream | 541400 | 47839388 ~ 47839722 (+) |
| LOC110528958 | NA | other | upstream | 1743168 | 46629591 ~ 46638492 (+) |
| G613664 | NA | other | upstream | 2101789 | 46278734 ~ 46279333 (+) |
| si:dkey-264d12.5 | LOC106582817 | other | upstream | 4352894 | 44002556 ~ 44035143 (+) |
| G610622 | NA | other | upstream | 4549242 | 43829004 ~ 43831880 (+) |
| G617133 | NA | other | downstream | 445469 | 48826827 ~ 48827227 (+) |
| tafa4b | LOC106583040 | other | downstream | 1190962 | 49571790 ~ 49620194 (+) |
| G618712 | LOC106583033 | other | downstream | 1922072 | 50303430 ~ 50304232 (+) |
| LOC110527970 | LOC106583026 | other | downstream | 2579136 | 50960494 ~ 51079129 (+) |
| G621650 | NA | other | downstream | 4009990 | 52391348 ~ 52391633 (+) |
