Gene
RNA
| Item | Value |
|---|---|
| gene id | G616834 |
| gene name | NA |
| gene type | non-coding |
| species | rainbow trout (Oncorhynchus mykiss) |
| category of species | economic fish |
| Item | Value |
|---|---|
| chromosome id | NC_048571.1 |
| NCBI id | CM023225.2 |
| chromosome length | 90918291 |
| location | 48714472 ~ 48714693 (+) |
| genome version | USDA_OmykA_1.1_2020_rainbow_trout_Genome |
| RNA id | representative | length | rna type | GC content | exon number | start site | end site |
|---|---|---|---|---|---|---|---|
| TU701917 | True | 222 | lncRNA | 0.36 | 1 | 48714472 | 48714693 |
| gene id | symbol | gene type | direction | distance | location |
|---|---|---|---|---|---|
| LOC110527925 | LOC106582912 | coding | upstream | 429 | 48470687 ~ 48714043 (+) |
| LOC110527924 | kcnkf | coding | upstream | 432295 | 48277681 ~ 48282177 (+) |
| LOC110510677 | LOC100136421 | coding | upstream | 499926 | 48196782 ~ 48214546 (+) |
| LOC110527921 | LOC106582906 | coding | upstream | 546268 | 48127960 ~ 48168204 (+) |
| LOC110527919 | LOC106565791 | coding | upstream | 646276 | 48066923 ~ 48068196 (+) |
| lsm14b | LOC106582791 | coding | downstream | 22578 | 48737271 ~ 48740708 (+) |
| LOC110527931 | LOC106582916 | coding | downstream | 120501 | 48835194 ~ 48845739 (+) |
| LOC110527932 | LOC106582918 | coding | downstream | 147132 | 48861825 ~ 48874455 (+) |
| cidec | cidec | coding | downstream | 170516 | 48885209 ~ 48896546 (+) |
| LOC110527934 | LOC106582919 | coding | downstream | 181959 | 48896652 ~ 48915101 (+) |
| G616719 | NA | non-coding | upstream | 126641 | 48539913 ~ 48587831 (+) |
| G616660 | NA | non-coding | upstream | 245118 | 48468950 ~ 48469354 (+) |
| G616643 | NA | non-coding | upstream | 249534 | 48464705 ~ 48464938 (+) |
| G616607 | NA | non-coding | upstream | 287404 | 48426864 ~ 48427068 (+) |
| G616603 | NA | non-coding | upstream | 289745 | 48424263 ~ 48424727 (+) |
| G617119 | NA | non-coding | downstream | 96665 | 48811358 ~ 48811629 (+) |
| G617122 | NA | non-coding | downstream | 98326 | 48813019 ~ 48813288 (+) |
| G617126 | NA | non-coding | downstream | 103359 | 48818052 ~ 48818306 (+) |
| G617129 | NA | non-coding | downstream | 107006 | 48821699 ~ 48821995 (+) |
| G617130 | NA | non-coding | downstream | 109358 | 48824051 ~ 48824312 (+) |
| G615624 | NA | other | upstream | 874750 | 47839388 ~ 47839722 (+) |
| LOC110528958 | NA | other | upstream | 2076518 | 46629591 ~ 46638492 (+) |
| G613664 | NA | other | upstream | 2435139 | 46278734 ~ 46279333 (+) |
| si:dkey-264d12.5 | LOC106582817 | other | upstream | 4686244 | 44002556 ~ 44035143 (+) |
| G610622 | NA | other | upstream | 4882592 | 43829004 ~ 43831880 (+) |
| G617133 | NA | other | downstream | 112134 | 48826827 ~ 48827227 (+) |
| tafa4b | LOC106583040 | other | downstream | 857627 | 49571790 ~ 49620194 (+) |
| G618712 | LOC106583033 | other | downstream | 1588737 | 50303430 ~ 50304232 (+) |
| LOC110527970 | LOC106583026 | other | downstream | 2245801 | 50960494 ~ 51079129 (+) |
| G621650 | NA | other | downstream | 3676655 | 52391348 ~ 52391633 (+) |
