G617122


Basic Information

Item Value
gene id G617122
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048571.1
NCBI id CM023225.2
chromosome length 90918291
location 48813019 ~ 48813288 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU702215
gtctcaggatggtaagttggtggtcgaaaatatccctctagtggtgtgggggctgtgctttggcaaagtgggtggggttatagccttcctgtttggccctgtccgggggtgtcctcttatggggccacagtgtctcctgacccctcctgtctcagcctccagtatttatgctgcagtagtttatgtgtcggggggctagggtcagtttgttatatctggagtacttctcctgtcctattcggtgtcctgtgtgaatttaagtgtgctctc

Function

NR:

description
unnamed protein product

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU702215 True 270 lncRNA 0.52 1 48813019 48813288

Neighbor

gene id symbol gene type direction distance location
lsm14b LOC106582791 coding upstream 72311 48737271 ~ 48740708 (+)
LOC110527925 LOC106582912 coding upstream 98976 48470687 ~ 48714043 (+)
LOC110527924 kcnkf coding upstream 530842 48277681 ~ 48282177 (+)
LOC110510677 LOC100136421 coding upstream 598473 48196782 ~ 48214546 (+)
LOC110527921 LOC106582906 coding upstream 644815 48127960 ~ 48168204 (+)
LOC110527931 LOC106582916 coding downstream 21906 48835194 ~ 48845739 (+)
LOC110527932 LOC106582918 coding downstream 48537 48861825 ~ 48874455 (+)
cidec cidec coding downstream 71921 48885209 ~ 48896546 (+)
LOC110527934 LOC106582919 coding downstream 83364 48896652 ~ 48915101 (+)
trnaf-gaa-78 NA coding downstream 112431 48925719 ~ 48925791 (+)
G617119 NA non-coding upstream 1390 48811358 ~ 48811629 (+)
G616834 NA non-coding upstream 98326 48714472 ~ 48714693 (+)
G616719 NA non-coding upstream 225188 48539913 ~ 48587831 (+)
G616660 NA non-coding upstream 343665 48468950 ~ 48469354 (+)
G616643 NA non-coding upstream 348081 48464705 ~ 48464938 (+)
G617126 NA non-coding downstream 4764 48818052 ~ 48818306 (+)
G617129 NA non-coding downstream 8411 48821699 ~ 48821995 (+)
G617130 NA non-coding downstream 10763 48824051 ~ 48824312 (+)
G617167 NA non-coding downstream 125314 48938602 ~ 48945932 (+)
G617203 NA non-coding downstream 133386 48946674 ~ 48947014 (+)
G615624 NA other upstream 973297 47839388 ~ 47839722 (+)
LOC110528958 NA other upstream 2175065 46629591 ~ 46638492 (+)
G613664 NA other upstream 2533686 46278734 ~ 46279333 (+)
si:dkey-264d12.5 LOC106582817 other upstream 4784791 44002556 ~ 44035143 (+)
G610622 NA other upstream 4981139 43829004 ~ 43831880 (+)
G617133 NA other downstream 13539 48826827 ~ 48827227 (+)
tafa4b LOC106583040 other downstream 759032 49571790 ~ 49620194 (+)
G618712 LOC106583033 other downstream 1490142 50303430 ~ 50304232 (+)
LOC110527970 LOC106583026 other downstream 2147206 50960494 ~ 51079129 (+)
G621650 NA other downstream 3578060 52391348 ~ 52391633 (+)

Expression


Co-expression Network