G617890


Basic Information

Item Value
gene id G617890
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048571.1
NCBI id CM023225.2
chromosome length 90918291
location 49568952 ~ 49569390 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU703094
catctgtgctcgacctcactaatgctcttgtggctgaatggaagcaagtcccacagcaatgttccaacatctagtggaaagcattcccagaagagtggaggctgttatagcagcaaaggggaccAAATgtatattaatgcccattattttggaatgagatgttcgtcgagcaggtgtccacatccttttggtcatgtagtgtatataggcCTAATGCCACCGGTGGTTCTCACTGCAGTTCAAACACTACCCACAGAGATCATTAAATCAATAAGCATTGCATCCCTTGTTTTGCCATTTAACTAACTTGTCTAGGCCTATCTAGTCTAGTTTGTGAGCTCACTTCTTTGTCATACTTTGCTCATGTCTTTTCTACCCAGGCCATAGATTTGATTTAGTTTTCATCATCTATTTCCTCTCTCGTCCATTTCCCCTAGTC

Function

NR:

description
unnamed protein product

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU703094 True 439 lncRNA 0.43 1 49568952 49569390

Neighbor

gene id symbol gene type direction distance location
LOC110527959 LOC106583042 coding upstream 3749 49549811 ~ 49565246 (+)
LOC110527958 tmf1 coding upstream 19151 49537189 ~ 49549801 (+)
nhe3 nhe3 coding upstream 34899 49515173 ~ 49534053 (+)
LOC110527957 uba3 coding upstream 81069 49473526 ~ 49487883 (+)
LOC110527119 NA coding upstream 182820 49384302 ~ 49386132 (+)
tafa4b LOC106583040 coding downstream 2400 49571790 ~ 49620194 (+)
LOC110527962 LOC106583035 coding downstream 530174 50099564 ~ 50229651 (+)
LOC110527965 LOC106583032 coding downstream 821148 50390538 ~ 50438666 (+)
magi1b LOC106583030 coding downstream 1027802 50597192 ~ 50798627 (+)
LOC110527968 LOC106612786 coding downstream 1047840 50617230 ~ 50621394 (+)
G617811 NA non-coding upstream 28518 49539936 ~ 49540434 (+)
G617769 NA non-coding upstream 92141 49457405 ~ 49476811 (+)
G617763 NA non-coding upstream 116665 49451892 ~ 49452287 (+)
G617447 NA non-coding upstream 129960 49438785 ~ 49438992 (+)
G617976 NA non-coding downstream 78711 49648101 ~ 49648349 (+)
G617993 NA non-coding downstream 90651 49660041 ~ 49661400 (+)
G618638 NA non-coding downstream 613897 50183287 ~ 50198852 (+)
G618673 NA non-coding downstream 664386 50233776 ~ 50234144 (+)
G618682 NA non-coding downstream 675876 50245266 ~ 50245650 (+)
G617133 NA other upstream 741725 48826827 ~ 48827227 (+)
G615624 NA other upstream 1729230 47839388 ~ 47839722 (+)
LOC110528958 NA other upstream 2930998 46629591 ~ 46638492 (+)
G613664 NA other upstream 3289619 46278734 ~ 46279333 (+)
si:dkey-264d12.5 LOC106582817 other upstream 5540724 44002556 ~ 44035143 (+)
G618712 LOC106583033 other downstream 734040 50303430 ~ 50304232 (+)
LOC110527970 LOC106583026 other downstream 1391104 50960494 ~ 51079129 (+)
G621650 NA other downstream 2821958 52391348 ~ 52391633 (+)
G621695 LOC106582949 other downstream 2921778 52491168 ~ 52493240 (+)

Expression


Co-expression Network