G617976


Basic Information

Item Value
gene id G617976
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048571.1
NCBI id CM023225.2
chromosome length 90918291
location 49648101 ~ 49648349 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU703187
tacatattctttatccctttacacttgtgtgtataaggtagtagttgtggaattgttaggttagattacttgttggttattactgcattgtcggaactagaagcacaagcatttcgctacactcacattaacatctgctaaccatgtgtatgtgacaaataacatttgattttgatttgaacgtgtctccggacctactcactgccacagtcatactctggacctagttttgtcccatggaatacatgT

Function

NR:

description
LOW QUALITY PROTEIN: transcription and mRNA export factor ENY2-like

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU703187 True 249 lncRNA 0.38 1 49648101 49648349

Neighbor

gene id symbol gene type direction distance location
tafa4b LOC106583040 coding upstream 27907 49571790 ~ 49620194 (+)
LOC110527959 LOC106583042 coding upstream 82898 49549811 ~ 49565246 (+)
LOC110527958 tmf1 coding upstream 98300 49537189 ~ 49549801 (+)
nhe3 nhe3 coding upstream 114048 49515173 ~ 49534053 (+)
LOC110527957 uba3 coding upstream 160218 49473526 ~ 49487883 (+)
LOC110527962 LOC106583035 coding downstream 451215 50099564 ~ 50229651 (+)
LOC110527965 LOC106583032 coding downstream 742189 50390538 ~ 50438666 (+)
magi1b LOC106583030 coding downstream 948843 50597192 ~ 50798627 (+)
LOC110527968 LOC106612786 coding downstream 968881 50617230 ~ 50621394 (+)
LOC110527969 LOC106583028 coding downstream 1231949 50880298 ~ 50957676 (+)
G617890 NA non-coding upstream 78711 49568952 ~ 49569390 (+)
G617811 NA non-coding upstream 107667 49539936 ~ 49540434 (+)
G617769 NA non-coding upstream 171290 49457405 ~ 49476811 (+)
G617763 NA non-coding upstream 195814 49451892 ~ 49452287 (+)
G617993 NA non-coding downstream 11692 49660041 ~ 49661400 (+)
G618638 NA non-coding downstream 534938 50183287 ~ 50198852 (+)
G618673 NA non-coding downstream 585427 50233776 ~ 50234144 (+)
G618682 NA non-coding downstream 596917 50245266 ~ 50245650 (+)
G618685 NA non-coding downstream 602122 50250471 ~ 50250675 (+)
G617133 NA other upstream 820874 48826827 ~ 48827227 (+)
G615624 NA other upstream 1808379 47839388 ~ 47839722 (+)
LOC110528958 NA other upstream 3010147 46629591 ~ 46638492 (+)
G613664 NA other upstream 3368768 46278734 ~ 46279333 (+)
G618712 LOC106583033 other downstream 655081 50303430 ~ 50304232 (+)
LOC110527970 LOC106583026 other downstream 1312145 50960494 ~ 51079129 (+)
G621650 NA other downstream 2742999 52391348 ~ 52391633 (+)
G621695 LOC106582949 other downstream 2842819 52491168 ~ 52493240 (+)
G623180 NA other downstream 4105557 53753906 ~ 53754119 (+)

Expression


Co-expression Network