G618638


Basic Information

Item Value
gene id G618638
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048571.1
NCBI id CM023225.2
chromosome length 90918291
location 50183287 ~ 50198852 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU703874
ctggcaacatttacacaaaaaaaaagaaaagcattcaaataaaatcatttacctttgaagaacttcagatgttttcaatgaggagactctcagatagcaaatgttcagtttttcctgaaagattatttgtttaggacaaatcgctccgttttctgcgtcacgtttagctatgaaaaaacccctgtatccaggattgtgtaaatctatcagcaagctcattagcataacacaacgttaactatttatgaaaatcgcaaatgaaatgaaataaatatgccatctctcaagcttagccttttgtaaacaacac

Function

GO: NA

KEGG:

id description

RNA

RNA id representative length rna type GC content exon number start site end site
TU703874 True 310 lncRNA 0.34 2 50183287 50198852

Neighbor

gene id symbol gene type direction distance location
tafa4b LOC106583040 coding upstream 563093 49571790 ~ 49620194 (+)
LOC110527959 LOC106583042 coding upstream 618084 49549811 ~ 49565246 (+)
LOC110527958 tmf1 coding upstream 633486 49537189 ~ 49549801 (+)
nhe3 nhe3 coding upstream 649234 49515173 ~ 49534053 (+)
LOC110527957 uba3 coding upstream 695404 49473526 ~ 49487883 (+)
LOC110527965 LOC106583032 coding downstream 191686 50390538 ~ 50438666 (+)
magi1b LOC106583030 coding downstream 398340 50597192 ~ 50798627 (+)
LOC110527968 LOC106612786 coding downstream 418378 50617230 ~ 50621394 (+)
LOC110527969 LOC106583028 coding downstream 681446 50880298 ~ 50957676 (+)
LOC110527970 LOC106583026 coding downstream 765240 50960494 ~ 51079129 (+)
G617993 NA non-coding upstream 521887 49660041 ~ 49661400 (+)
G617976 NA non-coding upstream 534938 49648101 ~ 49648349 (+)
G617890 NA non-coding upstream 613897 49568952 ~ 49569390 (+)
G617811 NA non-coding upstream 642853 49539936 ~ 49540434 (+)
G618673 NA non-coding downstream 34924 50233776 ~ 50234144 (+)
G618682 NA non-coding downstream 46414 50245266 ~ 50245650 (+)
G618685 NA non-coding downstream 51619 50250471 ~ 50250675 (+)
G618928 NA non-coding downstream 116380 50315232 ~ 50315532 (+)
G618944 NA non-coding downstream 128265 50327117 ~ 50327431 (+)
G617133 NA other upstream 1356060 48826827 ~ 48827227 (+)
G615624 NA other upstream 2343565 47839388 ~ 47839722 (+)
LOC110528958 NA other upstream 3545333 46629591 ~ 46638492 (+)
G613664 NA other upstream 3903954 46278734 ~ 46279333 (+)
G618712 LOC106583033 other downstream 104578 50303430 ~ 50304232 (+)
G621650 NA other downstream 2192496 52391348 ~ 52391633 (+)
G621695 LOC106582949 other downstream 2292316 52491168 ~ 52493240 (+)
G623180 NA other downstream 3555054 53753906 ~ 53754119 (+)

Expression


Co-expression Network