G618944


Basic Information

Item Value
gene id G618944
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048571.1
NCBI id CM023225.2
chromosome length 90918291
location 50327117 ~ 50327431 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU704185
gagttcaatcagtagcacacctaatctcaatttctcattgtgtgtgtgtgtgtctttgtgttttttttgtggtgtgtaaatgatTTTATAACTTCCTTGTCAAAAATTACCCTtagacaatctttgtaccctggtggtgtactgctttcatggaaatatgaacaaaggcgatgtttcactttttctaatgttggggtcactcgAGGAAAAGTAATgaaatttcaagttgaaaaaagATAACTTAGtgggttttctctgctgttaaacattgTGGCAGGTCATTTTTGACCCTTAACACAACACAAGGGTtaaatc

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU704185 True 315 lncRNA 0.36 1 50327117 50327431

Neighbor

gene id symbol gene type direction distance location
LOC110527962 LOC106583035 coding upstream 97466 50099564 ~ 50229651 (+)
tafa4b LOC106583040 coding upstream 706923 49571790 ~ 49620194 (+)
LOC110527959 LOC106583042 coding upstream 761914 49549811 ~ 49565246 (+)
LOC110527958 tmf1 coding upstream 777316 49537189 ~ 49549801 (+)
nhe3 nhe3 coding upstream 793064 49515173 ~ 49534053 (+)
LOC110527965 LOC106583032 coding downstream 63107 50390538 ~ 50438666 (+)
magi1b LOC106583030 coding downstream 269761 50597192 ~ 50798627 (+)
LOC110527968 LOC106612786 coding downstream 289799 50617230 ~ 50621394 (+)
LOC110527969 LOC106583028 coding downstream 552867 50880298 ~ 50957676 (+)
LOC110527970 LOC106583026 coding downstream 636661 50960494 ~ 51079129 (+)
G618928 NA non-coding upstream 11585 50315232 ~ 50315532 (+)
G618685 NA non-coding upstream 76442 50250471 ~ 50250675 (+)
G618682 NA non-coding upstream 81467 50245266 ~ 50245650 (+)
G618673 NA non-coding upstream 92973 50233776 ~ 50234144 (+)
G618638 NA non-coding upstream 128265 50183287 ~ 50198852 (+)
G618968 NA non-coding downstream 25895 50353326 ~ 50353577 (+)
G618971 NA non-coding downstream 28502 50355933 ~ 50356356 (+)
G618989 NA non-coding downstream 43134 50370565 ~ 50370810 (+)
G619085 NA non-coding downstream 114821 50442252 ~ 50442534 (+)
G619112 NA non-coding downstream 154833 50482264 ~ 50482571 (+)
G618712 LOC106583033 other upstream 22885 50303430 ~ 50304232 (+)
G617133 NA other upstream 1499890 48826827 ~ 48827227 (+)
G615624 NA other upstream 2487395 47839388 ~ 47839722 (+)
LOC110528958 NA other upstream 3689163 46629591 ~ 46638492 (+)
G621650 NA other downstream 2063917 52391348 ~ 52391633 (+)
G621695 LOC106582949 other downstream 2163737 52491168 ~ 52493240 (+)
G623180 NA other downstream 3426475 53753906 ~ 53754119 (+)
G624628 NA other downstream 4496206 54823637 ~ 54824199 (+)

Expression


Co-expression Network