G619085


Basic Information

Item Value
gene id G619085
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048571.1
NCBI id CM023225.2
chromosome length 90918291
location 50442252 ~ 50442534 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU704336
GAACGTCACACCTGCGTGACAGGtccaggatggcaacaacaacttcccaagttacaccaggaatgcacaatccctccatcagtgctcagactgtccgcaataggctgagagaggctggactgaggacttgtaggtctgttgtaaaggcaggtcctcaccagacatcaccggcaacaacgtcgcctatgggcacaaacccaccgtcactggaccagacaggactggcaaaaagtgctcttcacggTTTTgtgggtgatggtcagattcgcgtttatcgtcgaag

Function

NR:

description
unnamed protein product

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU704336 True 283 lncRNA 0.53 1 50442252 50442534

Neighbor

gene id symbol gene type direction distance location
LOC110527965 LOC106583032 coding upstream 3586 50390538 ~ 50438666 (+)
LOC110527962 LOC106583035 coding upstream 212601 50099564 ~ 50229651 (+)
tafa4b LOC106583040 coding upstream 822058 49571790 ~ 49620194 (+)
LOC110527959 LOC106583042 coding upstream 877049 49549811 ~ 49565246 (+)
LOC110527958 tmf1 coding upstream 892451 49537189 ~ 49549801 (+)
magi1b LOC106583030 coding downstream 154658 50597192 ~ 50798627 (+)
LOC110527968 LOC106612786 coding downstream 174696 50617230 ~ 50621394 (+)
LOC110527969 LOC106583028 coding downstream 437764 50880298 ~ 50957676 (+)
LOC110527970 LOC106583026 coding downstream 521558 50960494 ~ 51079129 (+)
psd6 psd6 coding downstream 650738 51093272 ~ 51097448 (+)
G618989 NA non-coding upstream 71442 50370565 ~ 50370810 (+)
G618971 NA non-coding upstream 85896 50355933 ~ 50356356 (+)
G618968 NA non-coding upstream 88675 50353326 ~ 50353577 (+)
G618944 NA non-coding upstream 114821 50327117 ~ 50327431 (+)
G618928 NA non-coding upstream 126720 50315232 ~ 50315532 (+)
G619112 NA non-coding downstream 39730 50482264 ~ 50482571 (+)
G619198 NA non-coding downstream 318743 50761277 ~ 50761738 (+)
G619590 NA non-coding downstream 402181 50844715 ~ 50844915 (+)
G619597 NA non-coding downstream 407600 50850134 ~ 50850383 (+)
G618712 LOC106583033 other upstream 138020 50303430 ~ 50304232 (+)
G617133 NA other upstream 1615025 48826827 ~ 48827227 (+)
G615624 NA other upstream 2602530 47839388 ~ 47839722 (+)
LOC110528958 NA other upstream 3804298 46629591 ~ 46638492 (+)
G621650 NA other downstream 1948814 52391348 ~ 52391633 (+)
G621695 LOC106582949 other downstream 2048634 52491168 ~ 52493240 (+)
G623180 NA other downstream 3311372 53753906 ~ 53754119 (+)
G624628 NA other downstream 4381103 54823637 ~ 54824199 (+)

Expression


Co-expression Network