XLOC_025423


Basic Information

Item Value
gene id XLOC_025423
gene name NA
gene type non-coding
species zebrafish (Danio rerio)
category of species model fish

Chromosome Information

Item Value
chromosome id NC_007114.7
NCBI id CM002887.2
chromosome length 62628489
location 29914444 ~ 29915357 (+)
genome version GRCz11_2017_zebrafish_Genome

Sequence

>TCONS_00052346
gtttatttcagtttaatgAAAGGTAATTGGTGTTCAAAACAATACTGGATTCCACTGATTTTAGTCTGCTAAATGCTCAAATATAAATGAAATTGGAAAAAGTGAACAGGAGATACGAAAGAAAATACACAAgcatttctctttttatttttctattacagCCGACAAGGTTTCAGATGCGTTGTGAGAAATATTCAATACAGAAATGCTGAGAAATCTTTAAGATATCTTTCACAAAGCTTAATTAATATAGTATTAAAACCCTTTAAATTAATGAAGAAAAAAGTTACACACACAAGAGTAAGGACCAAGGGAAATTAAAAAGAGGATATCTGGTAGAtcttaatttaatacatttccttGTCAAGGGTGATCTAGTCATAATCACAAGACTGCATGATGTCAAGTCTGAAATAATGTAACCTATAAACCTGACATTTCCACATGCGAGTTATAATGAAAGATATGCCACTAGAGGTCATCTACGCTTTAATatgttacatttttacacaatttaggaaataaataaatcctcAGCACTAAGCAGTAACGATGGTCATTTTATGAACACACTTTACAAAAATGACACATACTTTCTGACTAAAGCGTAGTTGGTATTACCTTTTAGACAATGGAAACTTACCAAAATGAGTCCTTATTAAACATTTTCTTCTGCAAATAAAATCAACCATGTGAAATTAATCATCTGATTATCACTGATTAGTACATTGAGGaatgtaaaatgtgaaaaaaaatatcagacactTGAGCATGTAAGTGTCTTTGGTAAAAATCAATGTGCTGCTGTGATGTTTATAGAGTTAGGGCTCGTTTCTTTTTGGAGAAGAACAACTTCCAGTTGACCCAGTTGCTCCAGTCCAAGTCTCCGGCTGAAATACAGGTGCCACCCGGCC

Function

GO: NA

KEGG:

id description
ko03230 Viral genome structure
ko05164 Influenza A
ko03200 Viral proteins

RNA

RNA id representative length rna type GC content exon number start site end site
TCONS_00052346 True 914 lncRNA 0.33 1 29914444 29915357

Neighbor

gene id symbol gene type direction distance location
XLOC_025422 BX901883.7 coding upstream 18470 29881035 ~ 29895974 (+)
XLOC_025421 cacng2a coding upstream 69269 29714775 ~ 29845175 (+)
XLOC_025420 NA coding upstream 204222 29687549 ~ 29710222 (+)
XLOC_025419 CT573429.1 coding upstream 242791 29664357 ~ 29671653 (+)
XLOC_025418 eif3d coding upstream 259519 29640837 ~ 29654925 (+)
XLOC_025424 BX901883.3 coding downstream 14225 29929582 ~ 29929887 (+)
XLOC_025425 ifi35 coding downstream 26420 29941777 ~ 29948955 (+)
XLOC_025426 NA coding downstream 51426 29966783 ~ 29967070 (+)
XLOC_025427 kcna7 coding downstream 65246 29980603 ~ 29983868 (+)
XLOC_025428 akt1s1 coding downstream 275062 30190419 ~ 30200557 (+)
XLOC_025429 BX649540.1 misc downstream 333382 30248739 ~ 30249036 (+)
XLOC_025417 NA non-coding upstream 274150 29639984 ~ 29640294 (+)
XLOC_025412 BX649558.1 non-coding upstream 504485 29406013 ~ 29409959 (+)
XLOC_025411 NA non-coding upstream 516293 29393465 ~ 29398151 (+)
XLOC_025431 CR936968.2 non-coding downstream 439411 30354768 ~ 30355587 (+)
XLOC_025432 NA non-coding downstream 582364 30497721 ~ 30506149 (+)
XLOC_025434 NA non-coding downstream 727805 30643162 ~ 30655558 (+)

Expression


Co-expression Network