G619590


Basic Information

Item Value
gene id G619590
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048571.1
NCBI id CM023225.2
chromosome length 90918291
location 50844715 ~ 50844915 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU704887
CTGTAACAGCTGAATAATTGCTTTTCAGGATATTCTCTTGATTCGTATTTGTTTTATCATCAGACTGCATCCAAACTGAAGCGAAACGATTAAGAGATATCATTGTGCAACTGTGTCTGGTCTTGTCATTCAAAGAGCAGTCTTGTTTTACAACTGTTAGCAGCAGTCTATAACAAACAAACTGCTCACATGGACTTGGCT

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU704887 True 201 lncRNA 0.38 1 50844715 50844915

Neighbor

gene id symbol gene type direction distance location
magi1b LOC106583030 coding upstream 46088 50597192 ~ 50798627 (+)
LOC110527968 LOC106612786 coding upstream 223321 50617230 ~ 50621394 (+)
LOC110527965 LOC106583032 coding upstream 406049 50390538 ~ 50438666 (+)
LOC110527962 LOC106583035 coding upstream 615064 50099564 ~ 50229651 (+)
tafa4b LOC106583040 coding upstream 1224521 49571790 ~ 49620194 (+)
LOC110527969 LOC106583028 coding downstream 35383 50880298 ~ 50957676 (+)
LOC110527970 LOC106583026 coding downstream 119177 50960494 ~ 51079129 (+)
psd6 psd6 coding downstream 248357 51093272 ~ 51097448 (+)
thoc7 thoc7 coding downstream 307135 51152050 ~ 51158063 (+)
LOC110528964 LOC106565849 coding downstream 407208 51252123 ~ 51418349 (+)
G619198 NA non-coding upstream 82977 50761277 ~ 50761738 (+)
G619112 NA non-coding upstream 362144 50482264 ~ 50482571 (+)
G619085 NA non-coding upstream 402181 50442252 ~ 50442534 (+)
G618989 NA non-coding upstream 473905 50370565 ~ 50370810 (+)
G618971 NA non-coding upstream 488359 50355933 ~ 50356356 (+)
G619597 NA non-coding downstream 5219 50850134 ~ 50850383 (+)
G619769 NA non-coding downstream 152666 50997581 ~ 51037048 (+)
G619775 NA non-coding downstream 163340 51008255 ~ 51008722 (+)
G619890 NA non-coding downstream 243104 51088019 ~ 51088431 (+)
G618712 LOC106583033 other upstream 540483 50303430 ~ 50304232 (+)
G617133 NA other upstream 2017488 48826827 ~ 48827227 (+)
G615624 NA other upstream 3004993 47839388 ~ 47839722 (+)
LOC110528958 NA other upstream 4206761 46629591 ~ 46638492 (+)
G621650 NA other downstream 1546433 52391348 ~ 52391633 (+)
G621695 LOC106582949 other downstream 1646253 52491168 ~ 52493240 (+)
G623180 NA other downstream 2908991 53753906 ~ 53754119 (+)
G624628 NA other downstream 3978722 54823637 ~ 54824199 (+)

Expression


Co-expression Network