G620230


Basic Information

Item Value
gene id G620230
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048571.1
NCBI id CM023225.2
chromosome length 90918291
location 51434281 ~ 51435206 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU705592
GcggacctgttgcaccctctataaccacctgtactattatttgaccctgctagtCATCTACAAACGTTTGAAAATCTTGAAGAACGGTGTTGCCTTAATTAATGGTCATGTACTCACTCTTATAGTGTCCACcaagcacagccagaagaagactggatacccctcagagcctggttcctctataggTTGCTTCCTAAATTCCTACCTTTCcagggagttttccctagccaccgtgcatctacatctgcattgcttgctcattggggttttagactgggtttctgtatagtcACATTGTgatatctgctgatgtaaaaaggtctttattaatacatttaattgattgattggcATATCTGTTTGATATTTCACACCCTTAATTGTTGGCGTTGATCATAATTGGAACAGGCCTTCGTAATTTCCAGACATTGTGTGTAATTCCAGGTTAGGCTATGGAGTTTTCAATGTAAATTCCAGAAAGCCACGTCTTATTGCAtcataaatgtttttaaaagggTTTAATTGTGCAATGAAAAGAATAACAACTTTCTCAAAAGTATAGGCCTAACAACTTTAGTTATTTTCcctcatttttttatttgtacgTATGCCTAGGTCGTTTTTCTACAAACATTCCAGAGCACTCTCAAATAATACACTTTATTTGACTACAGTCAATAAGTTGCGGATAGGTGTTTGGCCTTTTCAGAAAAAGTTAATAATCAAATTCCAACACAAACTTACCAGCTAGGATATCACGAGGTCAGTTATGCCCAATTAAACAATAATTAGGCAACGCTATCAAGTTGTCATCCCCCTCCTGCACGGACATTCTGGAACATGTCCACACACTCCACACCTACAACCTTATGGGGTTCAGTTTGACAGGCCGAATAATCAACAGTTAACCCAGTATGTCAAGTGTT

Function

NR:

description
unnamed protein product

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU705592 True 926 lncRNA 0.39 1 51434281 51435206

Neighbor

gene id symbol gene type direction distance location
LOC110527974 LOC106583021 coding upstream 1216 51429630 ~ 51433065 (+)
LOC110528964 LOC106565849 coding upstream 15932 51252123 ~ 51418349 (+)
thoc7 thoc7 coding upstream 276218 51152050 ~ 51158063 (+)
psd6 psd6 coding upstream 336833 51093272 ~ 51097448 (+)
LOC110527970 LOC106583026 coding upstream 355152 50960494 ~ 51079129 (+)
si:ch211-236d3.4 LOC106583019 coding downstream 1009913 52445119 ~ 52489548 (+)
LOC110527978 LOC106565857 coding downstream 1076064 52511270 ~ 52548815 (+)
LOC110527979 LOC106583014 coding downstream 1224428 52659634 ~ 52669736 (+)
LOC110527981 glt8d1 coding downstream 1246509 52681715 ~ 52691283 (+)
LOC118965296 NA coding downstream 1273406 52708612 ~ 52713563 (+)
G619981 NA non-coding upstream 182745 51250187 ~ 51251536 (+)
G619953 NA non-coding upstream 242298 51189822 ~ 51191983 (+)
G619890 NA non-coding upstream 345850 51088019 ~ 51088431 (+)
G619769 NA non-coding upstream 397233 50997581 ~ 51037048 (+)
G619775 NA non-coding upstream 425559 51008255 ~ 51008722 (+)
G620252 NA non-coding downstream 11135 51446341 ~ 51446574 (+)
G620282 NA non-coding downstream 50710 51485916 ~ 51487101 (+)
G620298 NA non-coding downstream 73039 51508245 ~ 51508461 (+)
G620308 NA non-coding downstream 97220 51532426 ~ 51532700 (+)
G620340 NA non-coding downstream 135792 51570998 ~ 51571286 (+)
G618712 LOC106583033 other upstream 1130049 50303430 ~ 50304232 (+)
tafa4b LOC106583040 other upstream 1814113 49571790 ~ 49620194 (+)
G617133 NA other upstream 2607054 48826827 ~ 48827227 (+)
G615624 NA other upstream 3594559 47839388 ~ 47839722 (+)
G621650 NA other downstream 956142 52391348 ~ 52391633 (+)
G621695 LOC106582949 other downstream 1055962 52491168 ~ 52493240 (+)
G623180 NA other downstream 2318700 53753906 ~ 53754119 (+)
G624628 NA other downstream 3388431 54823637 ~ 54824199 (+)
G624962 LOC106582975 other downstream 3612090 55047296 ~ 55052688 (+)

Expression


Co-expression Network