XLOC_025426


Basic Information

Item Value
gene id XLOC_025426
gene name NA
gene type non-coding
species zebrafish (Danio rerio)
category of species model fish

Chromosome Information

Item Value
chromosome id NC_007114.7
NCBI id CM002887.2
chromosome length 62628489
location 29966783 ~ 29967070 (+)
genome version GRCz11_2017_zebrafish_Genome

Sequence

>TCONS_00052347
AAGCCTACTTTTAAAATTACTATTATAATACATGCGAGAAACTCCATGCAAATGTTTACCTTGCCATTAAAATTAGGTTTTCACCAATATACGGAAACCCtttctacgttttttttttgtgtttgtgtgtaagcaagtattttacagcactttagaaatactcaaaaatgtatttgtcaatggtttcaaactattataattgatctaccaaagtcacacaagtggcaatttcacatccgccacatccataacggagagatttcACATGCATAATGACActtttcttca

Function

GO: NA

KEGG:

id description
ko03230 Viral genome structure
ko05164 Influenza A
ko03200 Viral proteins

RNA

RNA id representative length rna type GC content exon number start site end site
TCONS_00052347 True 288 lncRNA 0.32 1 29966783 29967070

Neighbor

gene id symbol gene type direction distance location
XLOC_025425 ifi35 coding upstream 17828 29941777 ~ 29948955 (+)
XLOC_025424 BX901883.3 coding upstream 36896 29929582 ~ 29929887 (+)
XLOC_025423 NA coding upstream 51426 29914444 ~ 29915357 (+)
XLOC_025422 BX901883.7 coding upstream 70809 29881035 ~ 29895974 (+)
XLOC_025421 cacng2a coding upstream 121608 29714775 ~ 29845175 (+)
XLOC_025427 kcna7 coding downstream 13533 29980603 ~ 29983868 (+)
XLOC_025428 akt1s1 coding downstream 223349 30190419 ~ 30200557 (+)
XLOC_025430 mybpc2a coding downstream 290512 30257582 ~ 30353255 (+)
XLOC_025431 CR936968.2 coding downstream 387698 30354768 ~ 30355587 (+)
XLOC_025432 NA coding downstream 530651 30497721 ~ 30506149 (+)
XLOC_025429 BX649540.1 misc downstream 281669 30248739 ~ 30249036 (+)
XLOC_025420 NA non-coding upstream 256561 29687549 ~ 29710222 (+)
XLOC_025419 CT573429.1 non-coding upstream 295130 29664357 ~ 29671653 (+)
XLOC_025417 NA non-coding upstream 326489 29639984 ~ 29640294 (+)
XLOC_025434 NA non-coding downstream 676092 30643162 ~ 30655558 (+)
XLOC_025435 NA non-coding downstream 727104 30694174 ~ 30695807 (+)
XLOC_025436 NA non-coding downstream 901348 30868418 ~ 30873160 (+)

Expression


Co-expression Network