G620685


Basic Information

Item Value
gene id G620685
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048571.1
NCBI id CM023225.2
chromosome length 90918291
location 51754192 ~ 51754423 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU706070
ctgatcctcacaaggcacccaaATCTTTTTCCACTAAATCTAATTTTCCTTCCCCAGTGAATCACGatgatctgggcctggtcggatgtctgtagtagtatatccCTCTCGTCCGACTCATTGACGAAGAActctttgtccagtttgaggtgagcaattgcagttctgatgtccagaagctcttttcggtcataagagatgatAGCAGCAACATTAAGTACAAAACAAGTTA

Function

NR:

description
PREDICTED: neurotrophin receptor-interacting factor 1-like isoform X1

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU706070 True 232 lncRNA 0.43 1 51754192 51754423

Neighbor

gene id symbol gene type direction distance location
LOC110527974 LOC106583021 coding upstream 321127 51429630 ~ 51433065 (+)
LOC110528964 LOC106565849 coding upstream 335843 51252123 ~ 51418349 (+)
thoc7 thoc7 coding upstream 596129 51152050 ~ 51158063 (+)
psd6 psd6 coding upstream 656744 51093272 ~ 51097448 (+)
LOC110527970 LOC106583026 coding upstream 675063 50960494 ~ 51079129 (+)
si:ch211-236d3.4 LOC106583019 coding downstream 690696 52445119 ~ 52489548 (+)
LOC110527978 LOC106565857 coding downstream 756847 52511270 ~ 52548815 (+)
LOC110527979 LOC106583014 coding downstream 905211 52659634 ~ 52669736 (+)
LOC110527981 glt8d1 coding downstream 927292 52681715 ~ 52691283 (+)
LOC118965296 NA coding downstream 954189 52708612 ~ 52713563 (+)
G620429 NA non-coding upstream 54470 51699259 ~ 51699722 (+)
G620340 NA non-coding upstream 182906 51570998 ~ 51571286 (+)
G620308 NA non-coding upstream 221492 51532426 ~ 51532700 (+)
G620298 NA non-coding upstream 245731 51508245 ~ 51508461 (+)
G620282 NA non-coding upstream 267091 51485916 ~ 51487101 (+)
G621003 NA non-coding downstream 215708 51970131 ~ 51970436 (+)
G621015 NA non-coding downstream 224225 51978648 ~ 51979042 (+)
G621073 NA non-coding downstream 264889 52019312 ~ 52019644 (+)
G621136 NA non-coding downstream 298819 52053242 ~ 52053587 (+)
G621155 NA non-coding downstream 314524 52068947 ~ 52069192 (+)
G618712 LOC106583033 other upstream 1449960 50303430 ~ 50304232 (+)
tafa4b LOC106583040 other upstream 2134024 49571790 ~ 49620194 (+)
G617133 NA other upstream 2926965 48826827 ~ 48827227 (+)
G615624 NA other upstream 3914470 47839388 ~ 47839722 (+)
G621650 NA other downstream 636925 52391348 ~ 52391633 (+)
G621695 LOC106582949 other downstream 736745 52491168 ~ 52493240 (+)
G623180 NA other downstream 1999483 53753906 ~ 53754119 (+)
G624628 NA other downstream 3069214 54823637 ~ 54824199 (+)
G624962 LOC106582975 other downstream 3292873 55047296 ~ 55052688 (+)

Expression


Co-expression Network