XLOC_025427 (kcna7)


Basic Information

Item Value
gene id XLOC_025427
gene name kcna7
gene type coding
species zebrafish (Danio rerio)
category of species model fish

Chromosome Information

Item Value
chromosome id NC_007114.7
NCBI id CM002887.2
chromosome length 62628489
location 29980603 ~ 29983868 (+)
genome version GRCz11_2017_zebrafish_Genome

Sequence

>TCONS_00050158
GGACAGAGTTTACAGGAGAAAACACCTCCTGGGCTCAGAGAGTGGAGCGGGACAGTAGACGGACAGCTCATGTGCGGTGTAGGTAGAGAAGAAACACGGAGAGTGTTGGCTAACTACTCTGGAGCTACAGTCATAAGTGGCAGAGGGCTGAGGGAAGAGCAAAGAAGAAGAGATGGACAAAGGAGAAGGAGAAGAAGAATCGAACAGTAAAATGGAGGACAAGACACAAACAGAGGAAGAGGTGAGCGAGAGTGACAAGAAGCTCAAGGACCAGCGCAACAAGGCCGAAAAGGGGGACAAAGAGAAGGGCGAGAAGAAAAGAGAGAACCGCAGGTCTGGCTCCACTTGGAGAGGAGGCTGGGCGCTGTCTGAGCGACTGGCCATCAACGTATCAGGCATGCGCTATGAGACACAGATTCGAACCCTTGCCCAGTTCCCCGACTCTCTGCTTGGAGACCCTCGAAGACGTCTGCGCTACTTTGACCCACTGCGCAACGAGATCTTTCTGGACCGAAACCGATTCTGCTTTGATGCCATCCTGTACTTCTACCAATCTGGAGGTCGGTTACGACGACCTGCCAATGTGCCGCTAGACGTCTTCATGGACGAACTGCGCTTTTATGAGCTGGGAGAGGATATCATGGCCCGCTTCAAAGAGGACGAGGGCTTCCCCAAGGAGGAGCCCAGGCCCCTACCAGAAAGTGAGTTCCAGCGCAAAATTTGGATGCTCTTTGAACACCCAGAGTCTTCTGGAGGTGCCCGCATCATCGCCATCATCAGTGTGATGGTCATCGTGGTCTCCATCCTCATCTTCTGTTTGGAGACACTGCCTGATTTCAGAGTGGAGAAGGAGCAGAGAGAGGTCAGTGTT

Function

symbol description
kcna7 Predicted to enable voltage-gated potassium channel activity. Predicted to act upstream of or within potassium ion transport; protein homooligomerization; and regulation of ion transmembrane transport. Predicted to be located in membrane. Predicted to be integral component of membrane. Predicted to be part of voltage-gated potassium channel complex. Orthologous to human KCNA7 (potassium voltage-gated channel subfamily A member 7).

GO:

id name namespace
GO:0071805 potassium ion transmembrane transport biological_process
GO:0034765 regulation of ion transmembrane transport biological_process
GO:0051260 protein homooligomerization biological_process
GO:0006811 ion transport biological_process
GO:0006813 potassium ion transport biological_process
GO:0016020 membrane cellular_component
GO:0016021 integral component of membrane cellular_component
GO:0008076 voltage-gated potassium channel complex cellular_component
GO:0005244 voltage-gated ion channel activity molecular_function
GO:0005249 voltage-gated potassium channel activity molecular_function
GO:0005267 potassium channel activity molecular_function

KEGG:

id description
ko04040 Ion channels

ZFIN:

id description
ZDB-GENE-120215-257 Predicted to enable voltage-gated potassium channel activity. Predicted to act upstream of or within potassium ion transport; protein homooligomerization; and regulation of ion transmembrane transport. Predicted to be located in membrane. Predicted to be integral component of membrane. Predicted to be part of voltage-gated potassium channel complex. Orthologous to human KCNA7 (potassium voltage-gated channel subfamily A member 7).

Ensembl:

ensembl_id ENSDARG00000086571

RNA

RNA id representative length rna type GC content exon number start site end site
TCONS_00050158 True 871 mRNA 0.53 2 29980603 29983868

Neighbor

gene id symbol gene type direction distance location
XLOC_025426 NA coding upstream 13533 29966783 ~ 29967070 (+)
XLOC_025425 ifi35 coding upstream 31648 29941777 ~ 29948955 (+)
XLOC_025424 BX901883.3 coding upstream 50716 29929582 ~ 29929887 (+)
XLOC_025423 NA coding upstream 65246 29914444 ~ 29915357 (+)
XLOC_025422 BX901883.7 coding upstream 84629 29881035 ~ 29895974 (+)
XLOC_025428 akt1s1 coding downstream 206551 30190419 ~ 30200557 (+)
XLOC_025430 mybpc2a coding downstream 273714 30257582 ~ 30353255 (+)
XLOC_025431 CR936968.2 coding downstream 370900 30354768 ~ 30355587 (+)
XLOC_025432 NA coding downstream 513853 30497721 ~ 30506149 (+)
XLOC_025433 si:dkey-13n23.3 coding downstream 517100 30500968 ~ 30504419 (+)
XLOC_025429 BX649540.1 misc downstream 264871 30248739 ~ 30249036 (+)
XLOC_025420 NA non-coding upstream 270381 29687549 ~ 29710222 (+)
XLOC_025419 CT573429.1 non-coding upstream 308950 29664357 ~ 29671653 (+)
XLOC_025434 NA non-coding downstream 659294 30643162 ~ 30655558 (+)
XLOC_025435 NA non-coding downstream 710306 30694174 ~ 30695807 (+)
XLOC_025436 NA non-coding downstream 884550 30868418 ~ 30873160 (+)

Expression


Co-expression Network

Homologous

species gene id symbol gene type chromosome NCBI id location
grasscarp (Ctenopharyngodon idella) CI01000069_02256234_02263001 NA coding CI01000069 null 2256169 ~ 2263121 (+)