Gene
RNA
| Item | Value |
|---|---|
| gene id | G621003 |
| gene name | NA |
| gene type | non-coding |
| species | rainbow trout (Oncorhynchus mykiss) |
| category of species | economic fish |
| Item | Value |
|---|---|
| chromosome id | NC_048571.1 |
| NCBI id | CM023225.2 |
| chromosome length | 90918291 |
| location | 51970131 ~ 51970436 (+) |
| genome version | USDA_OmykA_1.1_2020_rainbow_trout_Genome |
| description |
|---|
| ZK1236.4, partial |
| RNA id | representative | length | rna type | GC content | exon number | start site | end site |
|---|---|---|---|---|---|---|---|
| TU706403 | True | 306 | lncRNA | 0.53 | 1 | 51970131 | 51970436 |
| gene id | symbol | gene type | direction | distance | location |
|---|---|---|---|---|---|
| LOC110527974 | LOC106583021 | coding | upstream | 537066 | 51429630 ~ 51433065 (+) |
| LOC110528964 | LOC106565849 | coding | upstream | 551782 | 51252123 ~ 51418349 (+) |
| thoc7 | thoc7 | coding | upstream | 812068 | 51152050 ~ 51158063 (+) |
| psd6 | psd6 | coding | upstream | 872683 | 51093272 ~ 51097448 (+) |
| LOC110527970 | LOC106583026 | coding | upstream | 891002 | 50960494 ~ 51079129 (+) |
| si:ch211-236d3.4 | LOC106583019 | coding | downstream | 474683 | 52445119 ~ 52489548 (+) |
| LOC110527978 | LOC106565857 | coding | downstream | 540834 | 52511270 ~ 52548815 (+) |
| LOC110527979 | LOC106583014 | coding | downstream | 689198 | 52659634 ~ 52669736 (+) |
| LOC110527981 | glt8d1 | coding | downstream | 711279 | 52681715 ~ 52691283 (+) |
| LOC118965296 | NA | coding | downstream | 738176 | 52708612 ~ 52713563 (+) |
| G620685 | NA | non-coding | upstream | 215708 | 51754192 ~ 51754423 (+) |
| G620429 | NA | non-coding | upstream | 270409 | 51699259 ~ 51699722 (+) |
| G620340 | NA | non-coding | upstream | 398845 | 51570998 ~ 51571286 (+) |
| G620308 | NA | non-coding | upstream | 437431 | 51532426 ~ 51532700 (+) |
| G620298 | NA | non-coding | upstream | 461670 | 51508245 ~ 51508461 (+) |
| G621015 | NA | non-coding | downstream | 8212 | 51978648 ~ 51979042 (+) |
| G621073 | NA | non-coding | downstream | 48876 | 52019312 ~ 52019644 (+) |
| G621136 | NA | non-coding | downstream | 82806 | 52053242 ~ 52053587 (+) |
| G621155 | NA | non-coding | downstream | 98511 | 52068947 ~ 52069192 (+) |
| G621449 | NA | non-coding | downstream | 286728 | 52257164 ~ 52257490 (+) |
| G618712 | LOC106583033 | other | upstream | 1665899 | 50303430 ~ 50304232 (+) |
| tafa4b | LOC106583040 | other | upstream | 2349963 | 49571790 ~ 49620194 (+) |
| G617133 | NA | other | upstream | 3142904 | 48826827 ~ 48827227 (+) |
| G615624 | NA | other | upstream | 4130409 | 47839388 ~ 47839722 (+) |
| G621650 | NA | other | downstream | 420912 | 52391348 ~ 52391633 (+) |
| G621695 | LOC106582949 | other | downstream | 520732 | 52491168 ~ 52493240 (+) |
| G623180 | NA | other | downstream | 1783470 | 53753906 ~ 53754119 (+) |
| G624628 | NA | other | downstream | 2853201 | 54823637 ~ 54824199 (+) |
| G624962 | LOC106582975 | other | downstream | 3076860 | 55047296 ~ 55052688 (+) |
