Gene
RNA
| Item | Value |
|---|---|
| gene id | G621079 |
| gene name | NA |
| gene type | non-coding |
| species | rainbow trout (Oncorhynchus mykiss) |
| category of species | economic fish |
| Item | Value |
|---|---|
| chromosome id | NC_048571.1 |
| NCBI id | CM023225.2 |
| chromosome length | 90918291 |
| location | 52020886 ~ 52021337 (-) |
| genome version | USDA_OmykA_1.1_2020_rainbow_trout_Genome |
| RNA id | representative | length | rna type | GC content | exon number | start site | end site |
|---|---|---|---|---|---|---|---|
| TU706479 | True | 452 | lncRNA | 0.39 | 1 | 52020886 | 52021337 |
| gene id | symbol | gene type | direction | distance | location |
|---|---|---|---|---|---|
| ptprga | LOC106583020 | coding | downstream | 294408 | 51449031 ~ 51726478 (-) |
| LOC110527973 | synpr | coding | downstream | 813677 | 51179203 ~ 51207209 (-) |
| LOC110527971 | LOC106583024 | coding | downstream | 868866 | 51097457 ~ 51152020 (-) |
| LOC118965295 | NA | coding | downstream | 929722 | 51087289 ~ 51091164 (-) |
| LOC118965294 | NA | coding | downstream | 1080922 | 50937209 ~ 50939964 (-) |
| LOC118965403 | NA | coding | upstream | 432502 | 52453839 ~ 52453893 (-) |
| camk1b | LOC106583015 | coding | upstream | 562452 | 52583789 ~ 52658755 (-) |
| spcs1 | spcs1 | coding | upstream | 648115 | 52669452 ~ 52672489 (-) |
| gnl3 | LOC106583012 | coding | upstream | 670004 | 52691341 ~ 52696843 (-) |
| LOC118965419 | NA | coding | upstream | 670775 | 52692112 ~ 52692187 (-) |
| G621076 | NA | non-coding | downstream | 960 | 52019654 ~ 52019926 (-) |
| G621014 | NA | non-coding | downstream | 42566 | 51977992 ~ 51978320 (-) |
| G620996 | NA | non-coding | downstream | 58308 | 51962354 ~ 51962578 (-) |
| G620550 | NA | non-coding | downstream | 447865 | 51572781 ~ 51573021 (-) |
| G621102 | NA | non-coding | upstream | 13075 | 52034412 ~ 52034704 (-) |
| G621154 | NA | non-coding | upstream | 47385 | 52068722 ~ 52068935 (-) |
| G621165 | NA | non-coding | upstream | 56189 | 52077526 ~ 52077727 (-) |
| G621347 | NA | non-coding | upstream | 102133 | 52123470 ~ 52255928 (-) |
| G621455 | NA | non-coding | upstream | 240733 | 52262070 ~ 52262285 (-) |
| G619733 | NA | other | downstream | 1062346 | 50956271 ~ 50958540 (-) |
| LOC110527964 | LOC106583033 | other | downstream | 1714730 | 50300364 ~ 50306278 (-) |
| LOC110527961 | LOC106565835 | other | downstream | 2084605 | 49660022 ~ 49936575 (-) |
| mustn1b | mstn1 | other | downstream | 2723638 | 49295040 ~ 49297305 (-) |
| G617632 | NA | other | downstream | 2824916 | 49195604 ~ 49195970 (-) |
| G622985 | NA | other | upstream | 1284199 | 53305536 ~ 53322831 (-) |
| G625426 | NA | other | upstream | 3051142 | 55072479 ~ 55075396 (-) |
| G625472 | LOC106582968 | other | upstream | 3143155 | 55164492 ~ 55188756 (-) |
| LOC110528020 | LOC106582955 | other | upstream | 3412119 | 55420466 ~ 55566988 (-) |
| G627254 | NA | other | upstream | 4669986 | 56691323 ~ 56696091 (-) |
