XLOC_025428 (akt1s1)


Basic Information

Item Value
gene id XLOC_025428
gene name akt1s1
gene type coding
species zebrafish (Danio rerio)
category of species model fish

Chromosome Information

Item Value
chromosome id NC_007114.7
NCBI id CM002887.2
chromosome length 62628489
location 30190419 ~ 30200557 (+)
genome version GRCz11_2017_zebrafish_Genome

Sequence

>TCONS_00050159
GTTTTTCAAAGCATTTGCGTGTTTCTCCTGCGCAATCTGGCAACCCTGGTCCGTTCCTACTGTAAACAGCGCTGTGAGCGTCGCTGCACTGGAGTCTAGGGGAGAGACAGGCACGGGCAGAAAGCTCCGAATAAAGAGGGCGTAAAAGTTTGAAGAAAAGGACGACTGTGGTAGAGGCGGGAGGATATTAAGAGAGTAACATCAGCAAGTGGTGACGTCCTCCCATCTCTCCCCTAGCTCTCTCATGCACGCATACACCATCACCCATTTCAAATGTGCCTCTTCTAATAGTCCCATCAGCATTATCTAAACCAAGTTGTCATTACCAAAGAGTGCTATcctcaaaaacacatttcataaGTGCATACATTCACATACGCCAGCATTTCAACATTCCAAAAAACAGTTCAGCAGAGCCATATTTGATGCATAAACACATCATGGCCTCTGTCGCCAAATCCTTGAACCCCGAGATCCCTGATAATCACAAAGAGTGCTGGTTGGCGCTGCTTGCTGCCGCAGAGGCGTACAGTCAGACGTCTGGATGTGATTTGGCTATTCTGACTGCGTATAAAAAGTTCCATCCATCCGGGATTGAGGTGGAAGGACAGAGGAATCATGAAGGAGGTGGGACGTCTGGAAGCAAGAAGTTTGATTATGAATATCATGTATGGGGTCAAGGGGCGTTGGCTGAGTCGTCACGGCGATACGTGGATGACATCGCCGTTCTGCACTCCACCACTGTATTGATGGCACAGAGACACACAAGGATGAATACAGATGAGGGCGGAGCCAAACTAGGCGTGGACATGCCATCTGATAGACTGAGCTTGACTGGAGATGGAGTCGGTACTGTTAGTCCGAACATGAGGCTCTATTCTCAGAGCTACCCGTCCATCTACAGTTCGGCTGCTGCTGCTGCCATTGGCCTGTCAGTCGGTCAACATGGAAACGGAGAGCGTGACAGAGAGAAAGCTGCAATGGAGGAAAGGGAGAGGGCAAGAGAGGGAGCAGAAATAGTGGACTTGGAGgaagaagatgaagatgatgaggaaGAAGATTTGGATGGAAGGAGACGTAACCTGAATGAATCGGCAGGTGTCTTCTCAATGGATGAGGACTCTTTGTCCCGGGACTGCGAGCCCTTCTTTGAGTCTGATGGGGAGGAGGAGAGCACTGATGGTTCTCTGAGTGAGGAAGCACCGCCGCCTCCTCGTGGTATGGCAATGGGTCACTTGGCGTCCCGCTCCTCCAACCCCATGTCAATGGCTCGTTCATTGCCTGTGTCAGTTCCGGTGTGGGGCTACAGGAACAATCATGCCCCTCAGGGAGACTCGCACAGTGGAGAACGGGTGGGCTGTGCAGACTTGGACCACATAGCTGCGAGTATGAAAGCCTTACTGGTCCCAGGAGCCACCGATGGGACGGAGATGTTCGGAGCACTGCCTCGGCCTCGTCTAAACACGGGCGACTTCTCTCTCAAACACTGAGAGGGtgattgtgtgcatatgtatgaatgACAGACTGAGCGTGCATGAGAATGACAGGTGAGCTCGCTTGTGTGCGTGAAAGAAGAGAGTTGACCAGAACCGGAGAGTTTCAAAGAATGTTTTTTAGCAAAGACGTTGCCAAAATCTGAAGCTTCTCCTGCATATCATTAATAGTATTTCTATGGCGTTTCAAGTGGCTAAACCTTTTACCAAACCTTCACATCTGCAGCagcaggaggaggaagaggagtagAGGTTTGATCAGCATGTCTTAATCGGGACAATTTCTTCTGGTTGTGGCAGACCTTAGTTACGTAGTGCATTTCACTGAGAAACACTAACAAACATCATTTCATTACTAATCATACGCAGTAACTGATAGATTTACTGAAGGTAATTGAGCTGATATACACCACATCCGTCATCAGAGAAGCGTTTTCCGTTAACAGACACTACATGTACTTGTATGTATAGACTGCTGAGTTCAGATGTGGATTCAGTAGTTTTTACTGTGAATGCTTACAAATGATGTCACTCTTTGGCTGCGTGAAATATCGTTCATTTCAGAAAGAGTTTCAAAGAATTTCTACAATAAGCAGGACAATAAGCTTTTAAAACACCAATGTTATAAATTATTCACCtgcaaattacatttttctgcATTCTTAGTGATTTAATGTGCTGATAACGGATATAAATGCCGACGTGCGAATTGTTGATTAGTTCGATGACTTCTCTGAAAAAGTTTTCGCTAGATTGAAGGATATGTCAGGTTTGAGGGTTTTCAACACTACAGATGTCAACCAGCTATGTGTTTATCTTAATTATTTCACGACTGTTCGATGTTGAAGTAAATGCGTTTTGAATAAACATGTTGTTTGTTGTTGAA

Function

symbol description
akt1s1 Predicted to be involved in negative regulation of TOR signaling and negative regulation of protein kinase activity. Predicted to act upstream of or within neurotrophin TRK receptor signaling pathway. Predicted to be active in cytoplasm. Is expressed in eye and male organism. Orthologous to human AKT1S1 (AKT1 substrate 1).

GO:

id name namespace
GO:0006469 negative regulation of protein kinase activity biological_process
GO:0048011 neurotrophin TRK receptor signaling pathway biological_process
GO:0032007 negative regulation of TOR signaling biological_process
GO:0005737 cytoplasm cellular_component

KEGG:

id description
ko04152 AMPK signaling pathway
ko04150 mTOR signaling pathway
ko04140 Autophagy - animal
ko04211 Longevity regulating pathway
ko04213 Longevity regulating pathway - multiple species
ko04714 Thermogenesis
ko05131 Shigellosis
ko04131 Membrane trafficking

ZFIN:

id description
ZDB-GENE-030131-482 Predicted to be involved in negative regulation of TOR signaling and negative regulation of protein kinase activity. Predicted to act upstream of or within neurotrophin TRK receptor signaling pathway. Predicted to be active in cytoplasm. Is expressed in eye and male organism. Orthologous to human AKT1S1 (AKT1 substrate 1).

Ensembl:

ensembl_id ENSDARG00000074667

RNA

RNA id representative length rna type GC content exon number start site end site
TCONS_00050159 True 2379 mRNA 0.46 6 30190419 30200557

Neighbor

gene id symbol gene type direction distance location
XLOC_025427 kcna7 coding upstream 206551 29980603 ~ 29983868 (+)
XLOC_025426 NA coding upstream 223349 29966783 ~ 29967070 (+)
XLOC_025425 ifi35 coding upstream 241464 29941777 ~ 29948955 (+)
XLOC_025424 BX901883.3 coding upstream 260532 29929582 ~ 29929887 (+)
XLOC_025423 NA coding upstream 275062 29914444 ~ 29915357 (+)
XLOC_025430 mybpc2a coding downstream 57025 30257582 ~ 30353255 (+)
XLOC_025431 CR936968.2 coding downstream 154211 30354768 ~ 30355587 (+)
XLOC_025432 NA coding downstream 297164 30497721 ~ 30506149 (+)
XLOC_025433 si:dkey-13n23.3 coding downstream 300411 30500968 ~ 30504419 (+)
XLOC_025434 NA coding downstream 442605 30643162 ~ 30655558 (+)
XLOC_025429 BX649540.1 misc downstream 48182 30248739 ~ 30249036 (+)
XLOC_025420 NA non-coding upstream 480197 29687549 ~ 29710222 (+)
XLOC_025419 CT573429.1 non-coding upstream 518766 29664357 ~ 29671653 (+)
XLOC_025435 NA non-coding downstream 493617 30694174 ~ 30695807 (+)
XLOC_025436 NA non-coding downstream 667861 30868418 ~ 30873160 (+)

Expression


Co-expression Network

Homologous

species gene id symbol gene type chromosome NCBI id location
grasscarp (Ctenopharyngodon idella) CI01000069_02393010_02396796 AKT1S1 coding CI01000069 null 2393010 ~ 2397732 (+)