G621449


Basic Information

Item Value
gene id G621449
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048571.1
NCBI id CM023225.2
chromosome length 90918291
location 52257164 ~ 52257490 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU706855
caatcatgaagtggaacgacatttattggatatttcaaacttttttaacaaatcaaaaactgaaaaattgggcgtgcaaaattattcagcccctttactttcagtgcagcaaactctctccagaagttcagtgaggatctctgaatgatccaacgttgacctaaatgactaatgatgataaatacaatccacctgtgtgtaatcaagtctctgtataaatgcacctgcactgtgatagtctcagaggtccgttaaaagtggaccataaacagatttggctcattaatctctagggtccaaataatgatgatccagaatcctttgaaa

Function

NR:

description
unnamed protein product, partial

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU706855 True 327 lncRNA 0.37 1 52257164 52257490

Neighbor

gene id symbol gene type direction distance location
LOC110527974 LOC106583021 coding upstream 824099 51429630 ~ 51433065 (+)
LOC110528964 LOC106565849 coding upstream 838815 51252123 ~ 51418349 (+)
thoc7 thoc7 coding upstream 1099101 51152050 ~ 51158063 (+)
psd6 psd6 coding upstream 1159716 51093272 ~ 51097448 (+)
LOC110527970 LOC106583026 coding upstream 1178035 50960494 ~ 51079129 (+)
si:ch211-236d3.4 LOC106583019 coding downstream 187629 52445119 ~ 52489548 (+)
LOC110527978 LOC106565857 coding downstream 253780 52511270 ~ 52548815 (+)
LOC110527979 LOC106583014 coding downstream 402144 52659634 ~ 52669736 (+)
LOC110527981 glt8d1 coding downstream 424225 52681715 ~ 52691283 (+)
LOC118965296 NA coding downstream 451122 52708612 ~ 52713563 (+)
G621155 NA non-coding upstream 187972 52068947 ~ 52069192 (+)
G621136 NA non-coding upstream 203577 52053242 ~ 52053587 (+)
G621073 NA non-coding upstream 237520 52019312 ~ 52019644 (+)
G621015 NA non-coding upstream 278122 51978648 ~ 51979042 (+)
G621003 NA non-coding upstream 286728 51970131 ~ 51970436 (+)
G621450 NA non-coding downstream 688 52258178 ~ 52258438 (+)
G621454 NA non-coding downstream 3431 52260921 ~ 52261121 (+)
G621489 NA non-coding downstream 22926 52280416 ~ 52280625 (+)
G621561 NA non-coding downstream 68338 52325828 ~ 52326081 (+)
G621562 NA non-coding downstream 69077 52326567 ~ 52326785 (+)
G618712 LOC106583033 other upstream 1952932 50303430 ~ 50304232 (+)
tafa4b LOC106583040 other upstream 2636996 49571790 ~ 49620194 (+)
G617133 NA other upstream 3429937 48826827 ~ 48827227 (+)
G615624 NA other upstream 4417442 47839388 ~ 47839722 (+)
G621650 NA other downstream 133858 52391348 ~ 52391633 (+)
G621695 LOC106582949 other downstream 233678 52491168 ~ 52493240 (+)
G623180 NA other downstream 1496416 53753906 ~ 53754119 (+)
G624628 NA other downstream 2566147 54823637 ~ 54824199 (+)
G624962 LOC106582975 other downstream 2789806 55047296 ~ 55052688 (+)

Expression


Co-expression Network